Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr5g2562 | ATGAAGTATTTTCTGAAGGGCTGTAAATGTGAACTTGTTCTATGCTTTCTGTTCTGCTGCTGTTTTCTATTGTCTGCAAGTCAGAGAACTGACCCTACTGAAGTTGACACATTGAGAACCATAAGGGACAATTTGATTGATATTAATGGAAATTTGAGCAGCTGGAGTCGCGGAGACCCATGTAATTCCAAGTGGACGGGAGTTCTGTGCTTGAATACAACATTAGAAGATGGCTTTCTACATGTTCAACGATTGCATCTAATGAATATGAGCTTGGCTGGAACTTTGGTACCTGAGATTGGAAACTTATCTCATCTGGAAATATTGGACTTTATGTGGAACAACATAACTGGGAATATTCCAAAGGAAATCGGCAAGATCAAAACTTTAAAACTCTTGCTCTTGAATGGAAATCAATTAATAGGTCATTTGCCAGAAGAGCTTGGCTATCTTCCAGTCTTGAACAGAATGCAAATTGATCAGAACAATATTACAGGACCAATACCTTTATCATTTGCAAACCTGACAAATGCACAACACTTTCACATGAACAACAATTCACTTAGTGGACAAATTCCATCGCAGCTTTCTGGCTTACGAAATCTTCTTCACCTTCTTCTTGACAACAACAATTTATCAGGAAAGCTCCCAGATGAGCTTGCTGAGATGCCAAGCCTAAAGATACTTCAACTTGATAACAACAACTTTGGTGGAAATAGCATTCCAGATTCTTATGGCAACATGTCAAAATTATTGAAATTGAGCCTTAGGAACTGCAATTTGACAGGACCAATTCCTGATTTCAGCAGGATACCACACCTTGGTTATCTTGACCTCAGTCTCAATCAATTCAATGAACCTATTCCTACTAATAAGCTATCTGAAAATATCACAACTATTGATTTATCAAATAATAAGCTTAATGGAACTATTCCATCTTACTTTTCTGATCTTCCACATCTTCAGAAATTGTCAATTGCAAACAACGCACTGAGTGGCAATGTTCCCTCTTCCATTTGGCAGAACAAAACTTTAAATGGAACAGAAAGACTTCTTTTGGACATGCAAAATAATCAGCTTACAAGCATATCAGGCAGTATATCAAATCTTCCATCAAATGTCACACTCCTGCTTCAGGGGAATCCTATATGCTCAAATAACAACTCCTTAGTTCAATTTTGTGGATCTAAAAGTGAAAACGATATGAATGGTAACTCCATTGTAAGCTGTCCAAGTCAACCATGCCCTCCTCCTTATGAATATTCTGCGCAGTGTGTCTGTGCCGTGCCATTGCTTATTCATTATCGGTTGAAGAGTCCAGGATTTTCAGATTTCCTTACATATGTGGAGGCATTTGTAAGCTTCTTAGCAAGTGGACTTAACATACATAGTAATCAGCTATTCATTAATAATTTCATGTGGGAAGAAGGTCGATTGAGAATGTACTTGAAGCTTTTTCCTGAATATGTTGATAATACAAGCTCTCATACTTTCAATGAAAGCGAGGTTATTCGGCTAAGAGACTTGTTCAGAGAATGGGATATCCATGAGAGTGACTTGTTTGGACCTTATGAACTTCTAGACTTCGTTCTCCTCGATCCTTACGAAGATGCGACTTCCTCCTCTTCAAGTTCAGGAATAAGCAAAGGTGCATTGGCTGGAATTGTCTTAGGTGCAATTGCCGGTTCAGTTACATTATCTGCAATTGTTGCCATTCTTATATTGAAAATACGCTTGAAAGATTACCGTACAATTTCCAGACGACGTAAATCTTCTAAGGTCTCGATAAAAATTGATGGTGTAAGGTCATTCAATTATGAAGAAATGGTGTTGGCTACAAACGATTTTAGTCAATCTGCTGAAATTGGACAAGGAGGGTATGGGAAGGTTTATAAAGGTAATCTTCATGATGGAACTGTCGTTGCCATAAAACGTGCACAAGAAGGTTCACTGCAAGGTGAGAGGGAGTTTCTTACAGAAATTCAACTGCTATCAAGGTTACATCATCGCAATCTTGTCTCTTTGATTGGTTACTGTGATGAAGATGGTGAACAGATGCTGGTTTATGAATACATGCCAAATGGAACACTAAGGGATCACATTTCTGCTAAATCTAAAGAACCGCTTAGTTTTGCCATGAGATTGAAGATTGCTCTAGGGTCAGCTAAAGGTCTTGTCTATCTACACACAGAAGCTGATCCTCCAATATTCCACAGAGATGTCAAAGCTAGCAACATATTATTAGACTCAAAATTCATAGCAAAAGTTGCTGATTTTGGACTTTCAAGACTAGCTCCAGTTCCAGATATTGAAGGCAACTTGCCTGGCCATGTATCTACAGTTGTAAAAGGGACCCCGGGTTACCTTGATCCAGAGTATTTCTTAACTCACAAGTTAACTGACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTTGAGCTTGTGACCGGAAAGCCACCAATCTTCCATGGTGAAAATATTATTAGACAGGTTAAACTGGCATTCGAATCGGGTGGAGTATTTTCGATTGTTGATAACCGAATGGGATTTTACACTTCTGAGTGTGTGGAAAAGCTTTTGAAATTGGGTTTAAAGTGCTGCAAAGATTCACCAGATGAAAGGCCTAAAATGGCAGAAGTGGCTAGAGAGCTTGAAATCATATTGACTATGATGCCTGAGTACCATGCCAAAAAGGGAGCTGATTATGACTTAAGTGATTCTGGAACCACATTTAGTTCACAACCCTCATCATCTAATATAAAGACTCCTTTTATAGTTTCAGGAGATATTTTGGGTAGTGACCTTGTTAGTGGTGACATACCTACCATTAGACCAAGATAG | 2844 | 0.385 | MKYFLKGCKCELVLCFLFCCCFLLSASQRTDPTEVDTLRTIRDNLIDINGNLSSWSRGDPCNSKWTGVLCLNTTLEDGFLHVQRLHLMNMSLAGTLVPEIGNLSHLEILDFMWNNITGNIPKEIGKIKTLKLLLLNGNQLIGHLPEELGYLPVLNRMQIDQNNITGPIPLSFANLTNAQHFHMNNNSLSGQIPSQLSGLRNLLHLLLDNNNLSGKLPDELAEMPSLKILQLDNNNFGGNSIPDSYGNMSKLLKLSLRNCNLTGPIPDFSRIPHLGYLDLSLNQFNEPIPTNKLSENITTIDLSNNKLNGTIPSYFSDLPHLQKLSIANNALSGNVPSSIWQNKTLNGTERLLLDMQNNQLTSISGSISNLPSNVTLLLQGNPICSNNNSLVQFCGSKSENDMNGNSIVSCPSQPCPPPYEYSAQCVCAVPLLIHYRLKSPGFSDFLTYVEAFVSFLASGLNIHSNQLFINNFMWEEGRLRMYLKLFPEYVDNTSSHTFNESEVIRLRDLFREWDIHESDLFGPYELLDFVLLDPYEDATSSSSSSGISKGALAGIVLGAIAGSVTLSAIVAILILKIRLKDYRTISRRRKSSKVSIKIDGVRSFNYEEMVLATNDFSQSAEIGQGGYGKVYKGNLHDGTVVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEDGEQMLVYEYMPNGTLRDHISAKSKEPLSFAMRLKIALGSAKGLVYLHTEADPPIFHRDVKASNILLDSKFIAKVADFGLSRLAPVPDIEGNLPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELVTGKPPIFHGENIIRQVKLAFESGGVFSIVDNRMGFYTSECVEKLLKLGLKCCKDSPDERPKMAEVARELEIILTMMPEYHAKKGADYDLSDSGTTFSSQPSSSNIKTPFIVSGDILGSDLVSGDIPTIRPR* | 948 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr5g2562 | 947 | Pfam | Protein kinase domain | 617 | 882 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mtr5g2562 | 947 | PANTHER | LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN | 14 | 918 | - | - | |
Mtr5g2562 | 947 | SUPERFAMILY | L domain-like | 45 | 411 | - | - | |
Mtr5g2562 | 947 | Pfam | Leucine rich repeat N-terminal domain | 32 | 70 | IPR013210 | - | |
Mtr5g2562 | 947 | SMART | serkin_6 | 616 | 888 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mtr5g2562 | 947 | Gene3D | Transferase(Phosphotransferase) domain 1 | 692 | 906 | - | - | |
Mtr5g2562 | 947 | Gene3D | Phosphorylase Kinase; domain 1 | 586 | 691 | - | - | |
Mtr5g2562 | 947 | ProSitePatterns | Protein kinases ATP-binding region signature. | 622 | 644 | IPR017441 | GO:0005524 | |
Mtr5g2562 | 947 | Gene3D | Ribonuclease Inhibitor | 32 | 186 | IPR032675 | - | |
Mtr5g2562 | 947 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 736 | 748 | IPR008271 | GO:0004672|GO:0006468 | |
Mtr5g2562 | 947 | Pfam | Leucine rich repeat | 296 | 342 | IPR001611 | GO:0005515 | |
Mtr5g2562 | 947 | Gene3D | Ribonuclease Inhibitor | 295 | 414 | IPR032675 | - | |
Mtr5g2562 | 947 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 14 | 918 | - | - | |
Mtr5g2562 | 947 | ProSiteProfiles | Protein kinase domain profile. | 616 | 889 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mtr5g2562 | 947 | Gene3D | Ribonuclease Inhibitor | 187 | 294 | IPR032675 | - | |
Mtr5g2562 | 947 | CDD | STKc_IRAK | 622 | 888 | - | - | |
Mtr5g2562 | 947 | SUPERFAMILY | Protein kinase-like (PK-like) | 601 | 903 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr5g2562 | Mtr-Chr5 | 33482833 | 33491744 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr5g2562 | 12 | 898 | Receptor kinase-like Gene Family | AT5G01950 | 58.269 | 0.0 | 996 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Mtr5g2562 | Pkinase | 1.8e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr5g2562 | - | - | gmx:100801035 | 1348.57 |