Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2540 ATGGAACAGGTACAATGCTTTGGGCGGAAGAAGAACGCCGTTGCAGTTACTCACTGCAAGAGAGGTCGCGGTCTGATCAAGATCAATGGATGTCCAATAGAACTGGTGGAGCCTGAGATTCTTCGTTTCAAGGCATACGAACCAATCCTCCTTCTCGGCAGACACCGTTTCAGCGGCGTTGATATGAGGATCCGTGTGAAGGGAGGAGGTCACACTTCTCAGATCTACGCCATTCGTCAGAGTATTGCTAAGGCTTTGGTTGCTTATTATCAGAAATATGTTGATGAACAGAGTAAGAAAGAAATTAAGGATATTCTTGTTCGTTATGATCGTACTCTTCTTGTTGCTGATCCTAGACGTTGTGAGCCTAAGAAGTTTGGTGGTCGTGGTGCTCGTGCTAGGTTCCAGAAATCTTATCGTTAG 423 0.4563 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2540 140 ProSitePatterns Ribosomal protein S9 signature. 68 86 IPR020574 GO:0003735|GO:0005840|GO:0006412
Mtr5g2540 140 Pfam Ribosomal protein S9/S16 8 140 IPR000754 GO:0003735|GO:0005840|GO:0006412
Mtr5g2540 140 Gene3D - 1 140 IPR014721 -
Mtr5g2540 140 SUPERFAMILY Ribosomal protein S5 domain 2-like 3 140 IPR020568 -
Mtr5g2540 140 PANTHER 30S RIBOSOMAL PROTEIN S9P 2 140 - -
Mtr5g2540 140 PANTHER RIBOSOMAL PROTEIN S9 2 140 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2540 Mtr-Chr5 33257415 33258118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2540 2 140 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 89.209 2.75e-92 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2540 K02960 - rcu:8288339 277.33