Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2539 ATGTTTTGTAAGAGAGAGAGCATGGAGGAATTCAAGGAAGAGAATCGTTATGTGGAAACTGATCCAACTGGTCGCTATGGTAGGTTTGGAGATGTTCTTGGAAAAGGGGCAATGAAGACAGTATACAAAGCAATTGATGAAGTACTTGGAATAGAGGTAGCATGGAACCAAGTCAGACTCAACGAGGTACTAAACACGCCGGACGATTTGCAGCGCCTTTACTCGGAGGTTCATCTCCTAAGCACACTCAAGCACCGGTCGATCATGCGATTCTACACATCTTGGATTGATATTGATAACAAGAACTTCAACTTTGTTACAGAAATGTTCACATCAGGCTCACTGAGAGAGTACCGGAGGAAATATAAGCGAGTAAGCTTACAAGCAATAAAGAGTTGGGCGCGCCAAATTTTACAAGGTCTAGTTTATTTACATGGCCATGATCCACCTGTAATCCATAGGGACCTAAAATGTGATAACATATTTGTCAATGGTCATCTTGGACAAGTGAAAATTGGTGACCTTGGACTAGCTGCAATTCTCCAAGGTTCTCAATCAGCTCATAGTGTTATAGGAACACCGGAGTTCATGGCACCGGAAATGTACGAGGAAGAATACAATGAACTTGCTGATGTTTACTCATTTGGCATGTGTGTATTGGAAATGCTCACATCTGATTATCCATATAGTGAATGTACTAATCCAGCACAGATATACAAGAAAGTGACATCGGGGAAGCTACCAATGTCATTTTTCCGCATTGAAGATGGGGAAGCGCGGAGATTCATTGGAAAATGTTTAGAACCTGCGGCAAATAGACCGTCAGCGAAAGATTTGTTGCTTGAACCTTTTCTTTCGACAGATGATACATCATCAGCAATGAAGTTAAAAATTCAGAAGCCGTTTTTGAATGAAAATGAGATGGAAAAACTTCAATTGAGTGATGAATTTCAAAGGACTGAAATGAAAGTCATAGGAAAGTTGAATCCTGAAGATGATACTATCTTTCTCAAAGTACAAATTTCAGATAAGAAATGTTCTGTTAGGAATGTATATTTTCCATTTGATATTCTCACTGATACTCCCATTGATGTTGCAATGGAGATGGTAAAAGAATTGGAGATTTCTGATTGGGATCCTTTTGATATTGCAAATATGATCAATAGAGAGATATCTGCTCTTCTACCACATAGATGGAAAAATGATTACTCAGATTCCTTCCATACATTCAGTTATCAAGATGATGATGTCGATGAATCTCGTCTTCATTTCCGCTCGATCTCTTCTTCTTCATCGTTACATGAATCAATACCAGATTTTGTCAGTAAATCTGAGGAAATATCGCACGGATATTATTTGCTCCATGATGATTTGCATGATGATAACAGTTCAAGATGCTCCTCACAAGGGACATATTCAAACTGGAACTATTATTCTATGGATGACCATGAACACAATATAGCCTCAATCAGAAAAGATAAGCTTCCCATCATGAAGAGTCACAATTGCAACCATTGTAAAATTATAGGAGGATCACAGAATTGTTCATCAAGTAAAAGTAAGATGGTGATGGAAAATCGAAAACTGACACGGAATAGGTCTCTGATCGATACACGGAGCCAATTGTTACACAGATCATTGGTTGATGAGTTGAACAAAAGAAGGCAAGTCAAGACAGTTGGTGCTGTGGAGAATATTGGATTTCAGTCACCTTATGATGTTAAATAG 1728 0.3854 MFCKRESMEEFKEENRYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEVLNTPDDLQRLYSEVHLLSTLKHRSIMRFYTSWIDIDNKNFNFVTEMFTSGSLREYRRKYKRVSLQAIKSWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILQGSQSAHSVIGTPEFMAPEMYEEEYNELADVYSFGMCVLEMLTSDYPYSECTNPAQIYKKVTSGKLPMSFFRIEDGEARRFIGKCLEPAANRPSAKDLLLEPFLSTDDTSSAMKLKIQKPFLNENEMEKLQLSDEFQRTEMKVIGKLNPEDDTIFLKVQISDKKCSVRNVYFPFDILTDTPIDVAMEMVKELEISDWDPFDIANMINREISALLPHRWKNDYSDSFHTFSYQDDDVDESRLHFRSISSSSSLHESIPDFVSKSEEISHGYYLLHDDLHDDNSSRCSSQGTYSNWNYYSMDDHEHNIASIRKDKLPIMKSHNCNHCKIIGGSQNCSSSKSKMVMENRKLTRNRSLIDTRSQLLHRSLVDELNKRRQVKTVGAVENIGFQSPYDVK* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2539 575 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 574 - -
Mtr5g2539 575 SUPERFAMILY Protein kinase-like (PK-like) 28 315 IPR011009 -
Mtr5g2539 575 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2539 575 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Mtr5g2539 575 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2539 575 CDD STKc_WNK 25 285 - -
Mtr5g2539 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Mtr5g2539 575 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
Mtr5g2539 575 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 6 574 - -
Mtr5g2539 575 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2539 575 Gene3D - 317 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2539 Mtr-Chr5 33243670 33247281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2539 17 574 MAP Kinase Kinase Kinase AT5G58350 57.292 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mtr5g2539 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2539 K08867 - gmx:100272203 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2539 5 33243670 33247281 Mtr5g2539 5 33243670 33247281 ECH