Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2538 ATGGGAAACAACAGGTTCAAATTTTCAGATATGATACCAAATGCTTGGTTTTACAAGCTAAAAGATATGAGCAAATCATCAAGGAAGAGAAATGGTTCTCATCATGTTATGAAGAACAAAGTTATATCTTCACCAACAACATCTCAAAGGTCTCATTCAAGCTATTCACATTATTTCTCAAATGAACCAAAAAGGAATGGTAAGTTATTCAACACACCAAGTCAGACCAAAGATTTGAATTTTCCATTTAATGATTCACCAAGAAGGTCTTCAAAGAGAAGGGCTAAAAGAAAAACCATTTACAAGCCTTCTCAACCATTTGATCAAGTTCAATCACAAGAACATGATTTGTCTTCAATTGAAAATTCTTCTTCTGAGTCTTATCATAATCAATGTGTTTCTTCTGAATCTGAATTTTGTGATAGCTTTTCTGTTCCTGATTTGGTTAACTGTAGTTGTAGAGTTAGCTCTTCAACTAATGATATCATCATAGACATGAACAATGAATCTTTTCAAGGCAATTCTAAAAACTTAGATGGTTTTGATGCATTTTCACAACTTGGTTTAGCTCCAATATTAACAAAGCAAGTCAAATTTGAAGAAAAGATTGCCAAGGTGACCGAATCGCGAAGTTCAACTGAATCAGACGAGCGAAAAATCGATCATTCATTCTCTACCAAAGTTACTCAAAGAAGGAGAAGAAAAAGTCAAATAGCCAGAAAAACTTCTCCTAATTCTCAAGGTATAAAGCTTAGAGTGAATTCACCAAAAATTGTTAGCAAAAAAATTCAAGCATGTGCAAGAAAGAGTATTTCAAAGAATGATGCAGGGTTTGTAGATGGATTTGCAGTTGTTAAGTCTTCAATTGATCCAATAAGTGATTTCAAAGAATCAATGGTGGAGATGATTGTGGAGAATAATATAAGGGAATCAAAGGATTTGGAGGATTTACTTGCTTGCTATCTTTCTCTTAATTCAAGTGAATATCATGATGTTATAGTTAAAGCTTTTGAGCAAATTTGGTATGACATGGCTCAACTTAGAATGTAA 1050 0.3305 MGNNRFKFSDMIPNAWFYKLKDMSKSSRKRNGSHHVMKNKVISSPTTSQRSHSSYSHYFSNEPKRNGKLFNTPSQTKDLNFPFNDSPRRSSKRRAKRKTIYKPSQPFDQVQSQEHDLSSIENSSSESYHNQCVSSESEFCDSFSVPDLVNCSCRVSSSTNDIIIDMNNESFQGNSKNLDGFDAFSQLGLAPILTKQVKFEEKIAKVTESRSSTESDERKIDHSFSTKVTQRRRRKSQIARKTSPNSQGIKLRVNSPKIVSKKIQACARKSISKNDAGFVDGFAVVKSSIDPISDFKESMVEMIVENNIRESKDLEDLLACYLSLNSSEYHDVIVKAFEQIWYDMAQLRM* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2538 349 Pfam DNA-binding domain 1 40 IPR025830 GO:0003677
Mtr5g2538 349 ProSiteProfiles OVATE domain profile. 284 343 IPR006458 -
Mtr5g2538 349 MobiDBLite consensus disorder prediction 27 122 - -
Mtr5g2538 349 PANTHER TRANSCRIPTION REPRESSOR OFP3 3 348 - -
Mtr5g2538 349 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 348 IPR038933 GO:0045892
Mtr5g2538 349 MobiDBLite consensus disorder prediction 210 247 - -
Mtr5g2538 349 MobiDBLite consensus disorder prediction 104 122 - -
Mtr5g2538 349 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 282 344 IPR006458 -
Mtr5g2538 349 Pfam Transcriptional repressor, ovate 288 344 IPR006458 -
Mtr5g2538 349 MobiDBLite consensus disorder prediction 210 227 - -
Mtr5g2538 349 MobiDBLite consensus disorder prediction 37 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2538 Mtr-Chr5 33237729 33239349 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mtr5g2538 Ovate 3.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2538 - - cam:101489571 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2538 5 33237729 33239349 Mtr5g2538 5 33237729 33239349 ECH