Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2534 ATGTCGGATATCGAACAGGCAGCAGCGCCAGCTCCGGCAGATGCTACCACCGCACTCTTCGGCAAATACGAGCTCGGAAAACTCCTAGGATGTGGCGCGTTTGCGAAAGTATACCACGCGCGGAACACCGAGAATGGACAGAGCGTGGCTGTGAAAGTGATCAACAAGAAGAAAATCTCCGCAACAGGACTCGCTGGACATGTGAAACGTGAAATTTCAATTATGAGTAAGCTTCGTCATCCGAATATTGTTCGGCTTCATGAAGTTCTTGCTACGAAAACGAAGATCTATTTTGTTATGGAGTTTGCTAAAGGTGGTGAATTATTCGCAAAAATTGCCAATAAAGGACGGTTTAGTGAAGATTTATCGCGTAGACTCTTTCAACAGCTTATCTCTGCTGTTGGATATTGTCATTCACACGGTGTTTTTCATCGTGATTTGAAACCTGAAAATCTGTTACTAGATGATAAGGGGAATTTGAAGGTTTCGGATTTTGGATTGAGTGCAGTGAAAGAGCAAGTTCGAATTGACGGGATGTTACACACGCTTTGTGGAACACCTGCATATGTGGCACCGGAGATTTTAGCGAAGAGAGGTTATGATGGAGCTAAGGTGGATATTTGGTCATGTGGTATTATACTGTTTGTTCTTGTGGCTGGTTATCTTCCATTTAATGATCCAAATTTGATGGTGATGTATAGGAAGATATATAGTGGGGAATTTAAGTGTCCGCGGTGGTTTTCACCGGATCTAAAGCGGTTTTTATCGCGGTTGATGGATACAAATCCGGAGACGAGGATAACTGTTGATGAGATTTTGAGGGATCCTTGGTTTAGAAAAGGGTATAAAGAGGTGAAGTTTTATGAGGAGGGTTTTGAATTTGAGAAGAAGGTTAATAATGGGGAAGAAGAGGGAAAACCGTTGGATTTCAATGCGTTTGATATTATATCGTTTTTCTCTAGAGGGTTGAATCTTTCAGGGTTTTTTATTGATGGTGGTGAAGGTGAGAGGTTTATGTTGAGGGAGTTACCGGAGAAGGTTGTGGAGAAGGCTGAGGCGGCCGCGAAGGCAGAGGGACTTGTGGTGAGGAGGAAGAAGGAATGTGGGGTGGAAATTGAAGAGCAGAATGGGGATTTGGTGATTGGGATTGAGATTTACCGATTAACCGCTGAGATGGTTGTGGTCGAGGTGAAGAGGTTTGGTGGGGACGCGGTTGCTTTCGAGGAAGTGTGGAAGAATAAGTTGAGGCCACATTTGTGCGATGCAACGACATCGAATCAGGACCAAACTCAGTCTCATGCGGTCCCTGCTAGTGTTGACTAG 1323 0.4429 MSDIEQAAAPAPADATTALFGKYELGKLLGCGAFAKVYHARNTENGQSVAVKVINKKKISATGLAGHVKREISIMSKLRHPNIVRLHEVLATKTKIYFVMEFAKGGELFAKIANKGRFSEDLSRRLFQQLISAVGYCHSHGVFHRDLKPENLLLDDKGNLKVSDFGLSAVKEQVRIDGMLHTLCGTPAYVAPEILAKRGYDGAKVDIWSCGIILFVLVAGYLPFNDPNLMVMYRKIYSGEFKCPRWFSPDLKRFLSRLMDTNPETRITVDEILRDPWFRKGYKEVKFYEEGFEFEKKVNNGEEEGKPLDFNAFDIISFFSRGLNLSGFFIDGGEGERFMLRELPEKVVEKAEAAAKAEGLVVRRKKECGVEIEEQNGDLVIGIEIYRLTAEMVVVEVKRFGGDAVAFEEVWKNKLRPHLCDATTSNQDQTQSHAVPASVD* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2534 440 Pfam NAF domain 309 363 IPR004041 GO:0007165
Mtr5g2534 440 SUPERFAMILY Protein kinase-like (PK-like) 20 293 IPR011009 -
Mtr5g2534 440 Pfam Protein kinase domain 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2534 440 SMART serkin_6 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2534 440 CDD CIPK_C 311 420 - -
Mtr5g2534 440 Gene3D Kinase associated domain 1, KA1 309 423 - -
Mtr5g2534 440 ProSiteProfiles NAF domain profile. 305 330 IPR018451 GO:0007165
Mtr5g2534 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Mtr5g2534 440 PANTHER - 1 426 - -
Mtr5g2534 440 ProSiteProfiles Protein kinase domain profile. 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2534 440 Gene3D Transferase(Phosphotransferase) domain 1 13 308 - -
Mtr5g2534 440 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Mtr5g2534 440 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2534 Mtr-Chr5 33196651 33198700 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2534 1 427 CBL-interacting serine-threonine protein kinases AT2G30360 63.014 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mtr5g2534 Pkinase 1.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2534 - - gmx:100813555 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2534 5 33196651 33198700 Mtr5g2534 5 33196651 33198700 ECH
Mtr3g1817 3 30640258 30641869 Mtr5g2534 5 33196651 33198700 PCT