Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2527 ATGGCTTCTAGTTCTCCTTGTCAAATATTCCTTGTGTTTGTTATGGTCACTTTGGTCACATCATTAATCCCTAGCAACGCATTGCTCACTCCTCATTTTTATGATAATGTTTGCCCTCAAGCATTACCAACCATAAAGTCAGTTGTTCTCCATGCAATTCTTAGGGAAAAACGCATTGGAGCATCTCTTCTACGCTTGCATTTTCATGACTGCTTCGTTAATGGTTGTGATGGATCAGTCCTGCTAGATGATACCCCAAATTTCACTGGGGAGAAGACAGCTCTTCCAAATATTAATTCAATCAGAGGATTTTCTGTGGTTGATGAAATCAAAGCAGCTGTTGATAAAGTATGCAAAGGCCCTGTTGTATCTTGTGCTGATATTTTAGCCACAGCAGCTCGTGATTCTGTAGCCATATTGGGAGGTCCACAATTTTTCTACAATGTGTTATTGGGAAGAAGAGATGCAAGAACAGCAAGCAAAGCAGCTGCAAATGCAAATCTTCCATCTCCAACATTCAACTTCTCGCAGCTTATTTCCAATTTCAAATCACAAGGTTTAAATGTAAAAGACCTAGTAGCTCTTTCTGGTGGCCACACTATAGGGTTTGCTAGGTGCACTACATTTAGAAACAGAATTTACAATGAAACAAACATTGATCCTATTTTTGCAGCATCTTTAAGGAAGACATGTCCTAGAAATGGTGGAGACAACAATTTAACACCACTTGATTTCACTCCTACAAGAGTTGAAAATACATATTATAGAGATTTGCTATACAAAAGAGGTGTCCTTCATTCTGATCAACAATTGTTTAAGGGACAAGGTAGTGAAAGTGACAAATTGGTGCAGCTATATAGTAAGAACACTTTTGCTTTTGCTAGTGATTTTAAGACTTCTTTGATCAAGATGGGGAACATCAAGCCTCTTACCGGGAGACAAGGCGAGATTCGACTCAATTGCAGAAGGGTCAGATAG 978 0.3896 MASSSPCQIFLVFVMVTLVTSLIPSNALLTPHFYDNVCPQALPTIKSVVLHAILREKRIGASLLRLHFHDCFVNGCDGSVLLDDTPNFTGEKTALPNINSIRGFSVVDEIKAAVDKVCKGPVVSCADILATAARDSVAILGGPQFFYNVLLGRRDARTASKAAANANLPSPTFNFSQLISNFKSQGLNVKDLVALSGGHTIGFARCTTFRNRIYNETNIDPIFAASLRKTCPRNGGDNNLTPLDFTPTRVENTYYRDLLYKRGVLHSDQQLFKGQGSESDKLVQLYSKNTFAFASDFKTSLIKMGNIKPLTGRQGEIRLNCRRVR* 326
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2527 325 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 Gene3D - 32 322 - -
Mtr5g2527 325 PANTHER PEROXIDASE 72-RELATED 8 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 CDD secretory_peroxidase 29 324 IPR033905 GO:0004601|GO:0042744
Mtr5g2527 325 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 SUPERFAMILY Heme-dependent peroxidases 29 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 Gene3D Peroxidase, domain 2 169 304 - -
Mtr5g2527 325 Pfam Peroxidase 47 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2527 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Mtr5g2527 325 PANTHER CATIONIC PEROXIDASE 8 324 - -
Mtr5g2527 325 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Mtr5g2527 325 ProSiteProfiles Plant heme peroxidase family profile. 28 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr5g2527 Mtr-Chr5 33090805 33093243 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2527 27 324 Peroxidase AT5G05340 58.804 2.17e-123 355
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2527 K00430 - gmx:100811170 501.516
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2527 5 33090805 33093243 Mtr5g2527 5 33090805 33093243 ECH