Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2520 ATGGAATCCCAAAATAATGAAGAGAATGTTGCTTCCAATTTGCTCAAGGCTCAAAGTCACGTATGGAATCACATTTTCAACTTCATAAATTCAATGTCGCTTAAATGTGTAGTTGACTTAGGCATACCAGATATTATACACAACCATGGGAAACCCATGCCTATCTCAAAACTCATTTCTTCACTACCAATCCACCCTTCAAAAAAGCCTTGCATCCATCGCTTGATGCGAATCATGACTCACTCTGGCTTCTTCTCTCAACAAAATATTGCGGCGAATGAGCCAGAAATTGAGTATATGTTAACTGATGCATCTAGATTATTACTTAAGGATAATCCAATGAGTGTGACACCATTCGTGTACGCGATGCTCGATCCAGTTATGATGAATCCTTGGCATCAATTCTCTATGTGGTTAAAAAATGATGATACTACATCATTTGAAACGACACACGGGATGTTGTTATGGGAATATGCTGCGTGTGACTCCAAATTTAACAACTTATTTAATGAGTCAATGGCAAATGATGCTCAATTAGTTTCCAATTTGTTGGTTGAGAAGTGCAAGGGAGTGTTCAATGAATTTGAGTCATTGGTTGATGTTGGAGGAGGAACAGGGACTATGGCAAAGACTTTTGCCAAATCATTCCCACAAATGGAGTGCATTGTGTTTGATCTACCACATGTTGTTGATGGTTTGCAAGGAAGTGAGAATCTAAGCTATGTTGGTGGAGACATGTTTAAAGAAATTCCGCCAACCGATGCAATTCTGTTGAAGTGGATATTGCATGACTGGAATGACGAAGAATGTGTGAAGATATTAAAGAATTGTAAGGATGCAATATCAAAGAAAGGTAAAGAAGGAAAGGTAGTTATCATAGACATGGTGTTAGATTGTGAGAAGGGAGACAATAATGAATCGGTTGAAACAAAACTCTTCTTTGATATGTTGATGATGGTAACACTCACCGGAAAAGAGAGAACCAAGAAAGAATGGGTTAAATTGATTTCTTCGGCCGGTTTTTGTGACTACAAGATAACTCCAATTTTAGGGTTAAGAGCTGTGATTGAGATATATACCCCTAAAATATAA 1092 0.3773 MESQNNEENVASNLLKAQSHVWNHIFNFINSMSLKCVVDLGIPDIIHNHGKPMPISKLISSLPIHPSKKPCIHRLMRIMTHSGFFSQQNIAANEPEIEYMLTDASRLLLKDNPMSVTPFVYAMLDPVMMNPWHQFSMWLKNDDTTSFETTHGMLLWEYAACDSKFNNLFNESMANDAQLVSNLLVEKCKGVFNEFESLVDVGGGTGTMAKTFAKSFPQMECIVFDLPHVVDGLQGSENLSYVGGDMFKEIPPTDAILLKWILHDWNDEECVKILKNCKDAISKKGKEGKVVIIDMVLDCEKGDNNESVETKLFFDMLMMVTLTGKERTKKEWVKLISSAGFCDYKITPILGLRAVIEIYTPKI* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2520 363 PANTHER O-METHYLTRANSFERASE 9 359 - -
Mtr5g2520 363 Pfam O-methyltransferase domain 132 341 IPR001077 GO:0008171
Mtr5g2520 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 358 IPR029063 -
Mtr5g2520 363 Gene3D - 2 108 IPR036388 -
Mtr5g2520 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 360 IPR016461 GO:0008168
Mtr5g2520 363 SUPERFAMILY "Winged helix" DNA-binding domain 12 113 IPR036390 -
Mtr5g2520 363 PANTHER O-METHYLTRANSFERASE 9 359 IPR016461 GO:0008168
Mtr5g2520 363 Gene3D Vaccinia Virus protein VP39 109 360 IPR029063 -
Mtr5g2520 363 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Mtr5g2520 363 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2520 Mtr-Chr5 33027758 33029856 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2520 32 346 Monolignol Biosynthesis Gene Families AT5G54160 33.125 4.04e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2520 - K16040 gmx:100781008 543.117