Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2517 ATGGAATCCCAAAATATAGAGCAGGTTGCTTCCAATTTGCTCAAAGCTCAAAGCCATGTATGGAATCACATGTTTAACTTCATAAATTCCATGTCACTTAAATGTGTAGTTGACTTAGGCATACCAGATATCATACACAACTATGGCAAACCCATACCACTCTCAAAACTCATTTCTTCACTATCAATCCACCCTTCAAAAAACCACGGCATTCATCGCTTGATGCGAATCATGACTCACTCCGGCTTCTTCTCTCAAAAAAACGTTATAGGGAATGAGCTAGAAATTGAGTATATGTTAACTGATGCATCTAAACTATTACTCAAGGACAATCCAATGAGTGTGGCACCATACGTGCACGCAATGGTCAATCCAGTTATGATGAATCCATGGTATCAATTCTCTACTTGGTTAAAAAATGACGATACTAACACATTCGAGACGACACATGGGATGTCAACATGGGAGTATGCTGCACGTGACTCCGAAATTAACAACTTATTTAACGAGTCAATGGCAAATGATACTCGATTAGTTTCTGATTTGTTGGTTGAGAAATGCAAGGGAGTGTTCAATGAAGTTGAGTCATTGGTTGATGTTGGAGGAGGTACGGGGACCATGGCAAAGACTCTTGTCAAATCATTCCCACAAATGGAGTGCATTGTGTTTGATCTTCCACATGTTGTTGATGGCTTGCAAGGAAGTGAAAAGCTAAGATATGTTGGTGGAGACATGTTTAAGGAAATTCCACCAGCAGATGCAATTTTGTTGAAGTGGATATTGCATGATTGGAACGACGAGCAATGTTTGAAGATTTTAAAGAATTGTAAGGATGCAATATCAAAGAAAGGTAAAGAAGGAAAGGTAGTTATCATAGACATGGTGTTAGATTGTGAGAAGGGAGACAATAATGAATCAGTTGAAACACAACTCTTCTTTGATATGTTGATGATGGCCCTATTAACAGGAAAAGAGAGAAATGAGAAGGAATGGATGAAATTGATTTCTTTGGCTGGTTTTAATGACTACAAGATAACACCAATTCTAGGCTTAAGGTCCATGATTGAGATCTATCCATAA 1080 0.3824 MESQNIEQVASNLLKAQSHVWNHMFNFINSMSLKCVVDLGIPDIIHNYGKPIPLSKLISSLSIHPSKNHGIHRLMRIMTHSGFFSQKNVIGNELEIEYMLTDASKLLLKDNPMSVAPYVHAMVNPVMMNPWYQFSTWLKNDDTNTFETTHGMSTWEYAARDSEINNLFNESMANDTRLVSDLLVEKCKGVFNEVESLVDVGGGTGTMAKTLVKSFPQMECIVFDLPHVVDGLQGSEKLRYVGGDMFKEIPPADAILLKWILHDWNDEQCLKILKNCKDAISKKGKEGKVVIIDMVLDCEKGDNNESVETQLFFDMLMMALLTGKERNEKEWMKLISLAGFNDYKITPILGLRSMIEIYP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2517 359 PANTHER O-METHYLTRANSFERASE 8 359 - -
Mtr5g2517 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 357 IPR029063 -
Mtr5g2517 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 359 IPR016461 GO:0008168
Mtr5g2517 359 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Mtr5g2517 359 Gene3D Vaccinia Virus protein VP39 108 359 IPR029063 -
Mtr5g2517 359 Pfam O-methyltransferase domain 131 341 IPR001077 GO:0008171
Mtr5g2517 359 SUPERFAMILY "Winged helix" DNA-binding domain 11 112 IPR036390 -
Mtr5g2517 359 Gene3D - 2 107 IPR036388 -
Mtr5g2517 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Mtr5g2517 359 PANTHER O-METHYLTRANSFERASE 8 359 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2517 Mtr-Chr5 33004357 33006706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2517 31 345 Monolignol Biosynthesis Gene Families AT5G54160 34.056 1.28e-53 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2517 - K16040 gmx:100781008 529.25