Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2516 ATGGAATCCCAAAAAAATGAAGAAAATGTTACTTCCAATTTGCTCAAAGCTCAAAGCCACATATGGAATCACATTTTCAACTTCATAAATTCCATGTCCCTTAAATGTGTGGTTGATTTAGGCATACCTGATATCATACACAATTATGGCAAACCCATATCACTCTCAAAACTTATTTCTTTGCTACCAATCCACCCTTCAAAAACATGCTTCATTCATCGCTTGATGCGAATAATGACTCATTCTAGTTTCTTCTCTCAATATAATGTTACCGAGAATGAGCTAGAAATCGAGTATATGTTAACCGATGCATCGATATTATTACTTAAGGACAATCCGATGAGCGTGACACCATTTGTACACGCGATGCTCGATCCAGTTTTGACAAATCCGTGGCATCAATTCTCTACTTGGTTAAAAAATGATGATCCTACAACATTTGAAACGACACACAGGATGTTGTTATGGGAATATGTTGCGTGTGACTCCAAATTTAGCAACTTATTCAATGAGTCCATGGCAAGTGATACTCGATTAGTGACCAATTTGTTGATTGAGAAGTGCAGGGGAGTATTCAATGGGTTGGAGTCATTGGTTGATGTTGGAGGTGGCACAGGGACCATGGCAAAGGCCCTTGCTAAATCATTCCCACAAATGGAGTTTAGTGTATTTGATCTACCACATGTTGTTGATGGCTTGCAAGGTAGTGAGAATCTAAACTATGTTGGTGGAGACATGTTTAAAGAAATTCCTCCAACAGACGCCATTTTGTTGAAGTGGATATTGCATGATTGGAATGACGAGGAATGTGTGAAAATATTAAAGAATTGCAAGGATGCAATATCAAAGAAAGGTAAACAAGGGAAAGTGATTGTGATAGACATGGTGTTGGAAAGTGAGAAGGAAAGCATTAATGAATCAGTTGAAACACAACTCTTCTTTGATATGTTGATGATGGTAGTACTTGCAGGAAAAGAGAGAAACAAGAAAGAATGGATTAAGTTGATTTCCTCTGCTGGTTTTAGCGACTACAAGATTACTCCAATTTTAGGTTTAAGGTCACTAATTGAGATCTATCCATAA 1083 0.3749 MESQKNEENVTSNLLKAQSHIWNHIFNFINSMSLKCVVDLGIPDIIHNYGKPISLSKLISLLPIHPSKTCFIHRLMRIMTHSSFFSQYNVTENELEIEYMLTDASILLLKDNPMSVTPFVHAMLDPVLTNPWHQFSTWLKNDDPTTFETTHRMLLWEYVACDSKFSNLFNESMASDTRLVTNLLIEKCRGVFNGLESLVDVGGGTGTMAKALAKSFPQMEFSVFDLPHVVDGLQGSENLNYVGGDMFKEIPPTDAILLKWILHDWNDEECVKILKNCKDAISKKGKQGKVIVIDMVLESEKESINESVETQLFFDMLMMVVLAGKERNKKEWIKLISSAGFSDYKITPILGLRSLIEIYP* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2516 360 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
Mtr5g2516 360 Pfam O-methyltransferase domain 132 342 IPR001077 GO:0008171
Mtr5g2516 360 PANTHER O-METHYLTRANSFERASE 9 360 - -
Mtr5g2516 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 358 IPR029063 -
Mtr5g2516 360 SUPERFAMILY "Winged helix" DNA-binding domain 11 113 IPR036390 -
Mtr5g2516 360 Gene3D Vaccinia Virus protein VP39 109 360 IPR029063 -
Mtr5g2516 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 360 IPR016461 GO:0008168
Mtr5g2516 360 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Mtr5g2516 360 PANTHER O-METHYLTRANSFERASE 9 360 IPR016461 GO:0008168
Mtr5g2516 360 Gene3D - 2 108 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2516 Mtr-Chr5 32995919 32998511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2516 46 360 Monolignol Biosynthesis Gene Families AT1G51990 33.956 6.30e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2516 - K16040 gmx:100781008 559.296