Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2509 ATGGCATCTTCATCAACAAGTAGTTTTGAAAATAATAATAATAATAATAATCATCAAAACTCTTTGAATGGTTTCAACAATTTCACTTTCTCAACACACCCTTTCATGTCCACTACTTTCTCTGACCTTTTAGCTTCTCCTGCTTCTGCTTCTGCTTCAGATGATAATAACAATTCAAGGGGTGTGCCAAAATTTAAGTCTACACCCCCTCCTTCTTTGCCTTTGTCACCTCCCCCTGTTTCTCCTTCTTCTTACTTTTCTATTCCTCCTGGTTTAAGCCCTGCTGAGTTTCTTGATTCTCCTGTTATGCTTAACTCTTCCAATATTTTGCCATCTCCTACAACTGGTGCTTTTGCTGCTCAAAGCAACTACAATTGGATGAACAATTCTGAGGGGAATCAGCAAATGAGAAAGGAAAATTTCTCTTTTCAAACCCAACAACAAGGGCCTGTTGTTTCTGCATCCACAACAACTTTTCAATCATCAACTGTTGGTGGAGTTCAACAACAACAGCAATGGAGTTATATAGAGAACACAAATCAGAATGCTTTTTCATCCGAAAAGAATATGATACAAACTACTGAAAATAACAACTCTTCAATGCAGAGTTTTTCACCTGAGATTGCTAGTGTTCAAACCAACAACACCAACAATGGATTTCAATCAGACTACTCCAATTACCAGCAACCACAGCAACAGCCAACTCAAACCTTAAGCCGAAGATCCGATGATGGATACAATTGGCGAAAATATGGACAAAAGCAAGTTAAGGGAAGTGAAAATCCGAGAAGTTACTACAAATGCACATACCCTAACTGTCCTACAAAGAAGAAAGTTGAGAGATCAATTGAGGGACAAGTTACTGAGATAGTTTATAAGGGTACTCATAATCATCCTAAGCCTCAATGTACGAGGAGAAACTCGTCATCATCTTCTAATGCTCTCGTGGTTGTTCCTGTTAATCCAATCAATGAAATCCATGATCAATCATATGCATCACATGGTAATGGACAAATGGATTCTGCTGCTACTCCCGAGAATTCTTCAATATCAATAGGAGGTGATGATGATTTCGAGCAGAGTTCTCACCAAAGGAGTAGATCAGGTGGTGCTGGTGATGAATTTGATGAAGAGGAACCGGAGGCTAAAAGATGGAAAAATGAAGGTGAAAATGAGGGTATATCAGCACAACCTGCAAGTAGAACTGTGAGAGAACCTAGAGTTGTAGTTCAGACAACAAGTGACATTGATATCCTGGATGATGGTTACAGATGGAGGAAATATGGACAGAAAGTTGTTAAGGGCAATCCAAATCCAAGGAGTTACTACAAATGTACACACCCTAACTGTCCAGTGAGGAAGCATGTTGAACGTGCTTCGCATGATTTAAGGGCTGTGATCACTACTTATGAAGGAAAACATAACCATGATGTCCCTGCTGCTCGTGGAAGCGGAAGCCATTCTGTGAACAGACCAATGCCAAACAACCCTTCAAATCCAAACAATGCTGCAGCCAGGCCTCTTCAGATTCAGAGGCCACAACAAGCACCTCAAGGACAATCACCATTCAACCTTCAAATGCTGCAGGGCCAAGGAAATTATGGATTCTCAAGGTTTGAGAATCAAATGGTGCCTTACATGAATCAACAACAGCAGCAGCAGCAACAAATGGCTGAAAATGGTTTTTCTTCTAGAGCTAAGGAAGAACCTAAAGATGACATGTTCCTTGAATCTTTGCTTTGCTGA 1746 0.4026 MASSSTSSFENNNNNNNHQNSLNGFNNFTFSTHPFMSTTFSDLLASPASASASDDNNNSRGVPKFKSTPPPSLPLSPPPVSPSSYFSIPPGLSPAEFLDSPVMLNSSNILPSPTTGAFAAQSNYNWMNNSEGNQQMRKENFSFQTQQQGPVVSASTTTFQSSTVGGVQQQQQWSYIENTNQNAFSSEKNMIQTTENNNSSMQSFSPEIASVQTNNTNNGFQSDYSNYQQPQQQPTQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSIEGQVTEIVYKGTHNHPKPQCTRRNSSSSSNALVVVPVNPINEIHDQSYASHGNGQMDSAATPENSSISIGGDDDFEQSSHQRSRSGGAGDEFDEEEPEAKRWKNEGENEGISAQPASRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPNCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNPSNPNNAAARPLQIQRPQQAPQGQSPFNLQMLQGQGNYGFSRFENQMVPYMNQQQQQQQQMAENGFSSRAKEEPKDDMFLESLLC* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2509 581 MobiDBLite consensus disorder prediction 292 312 - -
Mtr5g2509 581 MobiDBLite consensus disorder prediction 47 65 - -
Mtr5g2509 581 MobiDBLite consensus disorder prediction 1 20 - -
Mtr5g2509 581 ProSiteProfiles WRKY domain profile. 243 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g2509 581 MobiDBLite consensus disorder prediction 548 562 - -
Mtr5g2509 581 Gene3D WRKY domain 229 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g2509 581 MobiDBLite consensus disorder prediction 67 83 - -
Mtr5g2509 581 MobiDBLite consensus disorder prediction 473 504 - -
Mtr5g2509 581 MobiDBLite consensus disorder prediction 211 247 - -
Mtr5g2509 581 MobiDBLite consensus disorder prediction 548 581 - -
Mtr5g2509 581 MobiDBLite consensus disorder prediction 211 242 - -
Mtr5g2509 581 Pfam WRKY DNA -binding domain 243 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g2509 581 Pfam WRKY DNA -binding domain 420 476 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g2509 581 MobiDBLite consensus disorder prediction 328 406 - -
Mtr5g2509 581 MobiDBLite consensus disorder prediction 328 357 - -
Mtr5g2509 581 MobiDBLite consensus disorder prediction 47 83 - -
Mtr5g2509 581 MobiDBLite consensus disorder prediction 488 504 - -
Mtr5g2509 581 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 54 549 IPR044810 GO:0003700
Mtr5g2509 581 SMART WRKY_cls 242 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g2509 581 SMART WRKY_cls 419 478 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g2509 581 ProSiteProfiles WRKY domain profile. 414 479 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g2509 581 SUPERFAMILY WRKY DNA-binding domain 241 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g2509 581 MobiDBLite consensus disorder prediction 358 390 - -
Mtr5g2509 581 Gene3D WRKY domain 406 472 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g2509 581 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 54 549 - -
Mtr5g2509 581 SUPERFAMILY WRKY DNA-binding domain 411 479 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2509 Mtr-Chr5 32907086 32910928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2509 62 580 WRKY Transcription Factor Family AT2G38470 45.985 8.03e-115 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr5g2509 WRKY 2.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2509 K13424 - gmx:100127385 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2509 5 32907086 32910928 Mtr5g2509 5 32907086 32910928 ECH
Mtr3g1786 3 30268448 30272975 Mtr5g2509 5 32907086 32910928 PCT