Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2507 ATGGCTGCAACAAGCGAAAACGCGAACATTACCGGCGTTACACCAAATGGAACAACGTGGGTATGTGAACACTTGATCAAGTTTGAAAGATCAAAAGGAATTTTCTTACAAGATAACCCATTTAGTTACACATTGCCAGTGCTATTTCTACAAACCTCTTTAGCTTCTCTCTTTACCGCAATTTTACAATTCGTACTTGCACCACTTGGGCAGAGCAGCTTCGTTCCACAAATGCTGGCTGGCTTGATATTAGGACCGTCGTTTCTGGGAGAAAGCGAGTTTATAAGAAAATGGCTATTCCCACCAAGAACATTCTACATAAGTGAGACAATCTCATTTTATGGGTGCATGCTGTTCTTGTTCTTAATTGGAGTAAAAATCGATCTAGTTCTTATACAAAAACTATTCTTAACCCCCGATCAAGTTATATACGAAACCATATTTCCCATTGTACTTATGTTATCAACGGGTTCATTTCACGTTACCGCAATTCACTTGGCCGATTTAAAGCTATTAAATTCTGAAATGGGTCGAATAGCGATATCTGCATCCATGGTGAGTGGATCCACTTCATTATTGTTGATTACGACTATCGTCACGCAGAAACAAGGAACTTTAATGAAAGACAGTTCTAATGTAAATTGGATGACAATTTGTTTGCTAGCTATGATTGCCTTCACAATATGTGTTCTACGTCCCATAATGTTGTGGATGGTTATTGGAGAACATTTTACGCTTGGGCCTGTAATTCTTGGCTTGGCTGTACCTGACGGGCCTCCATTAGGATCAGCATTGACTGAAAGATTGGAAACAATGGTGTCAAAAATATTTTTGCCATTGTACTTTCTTTTTTGTGGTGCAAGTTTCAAATTGTTTTTAATTGATTCTCGTTGCTTTGTAACTGTGCAAATTATTGCTGTATTTGCATTTTTGGGAAAGGTTGGTGGTACTATGCTGCCTTCAATTTATTTGAAGATGCCACTTACTGATGTTCTATCTTTAGGACTACTCATGAGTTGTCAAGGCATCACACAATTACTTTACTTGCAGACTTCTATAGCCCTTGAATTTCTGGATCAAGAAACATATGGTAGTGGGTTGATAGCTCTGGTATGGGTAACAGGACTAATCACACCCATTGTGAAATTCCTATATGACCCATCTAAGAGATATTTGTCCTTAAATAAGAGAAGAACCATTGAACAATCAGCTTCAGATATTGAGCTACGTCTCATGGCATGTGTACACGATCAAGAAAACATACCATCCATGATCAATCTTCTTGAAATGTCAAACCCTTCACTGCGAAGTCCTATTTGTTTCTATGTCCTACATCTTATTCAACTTGCAGGAAGATCGACACCACTCTTCATAGATCATCAACCAATATATGGGAAGACTAAGTCGTCACACTCTTCTTATTCAAGACGCATAATAAACGCCTTTAGATCATATGAGCAACAAAAAGAGAATAGTGTGGTTGTGAAAATCTTCACGTCGATCTCGCCTTATGAGACAATGCATGATGAAATATGTATGCAAGTTGCTGAAAAGAGAGTGTGTTTGTTGATTGTGCCTTTTCATAGACAATGGAGACCTAACGGAATTACAGAATCTGCACACCCGGTTCGAGCTTTAAATCGCCAGTTGCTCAGAACGGCACCTTGTTCTGTTGGGATTCTAATCGAACGCGGTGCTTTGAATAGGAACAACCCTTTAACTAGTGTGTCATTCTATAGTGTTGGAGTAGTTTTCATCGAAGGTGAGGACGATCGCGAAGCGTTAGCATACGCCATGCGAATGGCAAATCAGCCAAATGTTAGCGTCACGATGGTTCGAATAATGGAGCCTAGAAAGAAAAATAAGAACATGACGAATAGGGATCCGAACGGCGATTTGATTCATAGGTTTAAAGTGGATTGTATTCAAATTAAACGTCATGATTATAAAGAGGAAATAGCAAGAGATAGTGTTGAAATGATAAATGTTATAAAGTCACTTGAAGGTTGTTTTGATTTGATTTTGGTTGGTAGAAGACATGAATGTGAGTCAGGTTTATTTAATGGATTATCTGAATGGAATGAGTATCCAGAACTTGGTCCTATGGGAGACATGTTAGTGGCTTCAGATTCTACTTTTGATGGTTCTGTTTTGGTGGTTCAGCAGCAAAAGAGGTCAGGGACTGGTTATCATGATTTGCATCTAGATTCCGGTTTCGTGACAAGACAAGAAAGCTTGACCATTGTGGAAGTACCTCATGATAGAAAGGTTTGGCCAATGGTTTAA 2286 0.3885 MAATSENANITGVTPNGTTWVCEHLIKFERSKGIFLQDNPFSYTLPVLFLQTSLASLFTAILQFVLAPLGQSSFVPQMLAGLILGPSFLGESEFIRKWLFPPRTFYISETISFYGCMLFLFLIGVKIDLVLIQKLFLTPDQVIYETIFPIVLMLSTGSFHVTAIHLADLKLLNSEMGRIAISASMVSGSTSLLLITTIVTQKQGTLMKDSSNVNWMTICLLAMIAFTICVLRPIMLWMVIGEHFTLGPVILGLAVPDGPPLGSALTERLETMVSKIFLPLYFLFCGASFKLFLIDSRCFVTVQIIAVFAFLGKVGGTMLPSIYLKMPLTDVLSLGLLMSCQGITQLLYLQTSIALEFLDQETYGSGLIALVWVTGLITPIVKFLYDPSKRYLSLNKRRTIEQSASDIELRLMACVHDQENIPSMINLLEMSNPSLRSPICFYVLHLIQLAGRSTPLFIDHQPIYGKTKSSHSSYSRRIINAFRSYEQQKENSVVVKIFTSISPYETMHDEICMQVAEKRVCLLIVPFHRQWRPNGITESAHPVRALNRQLLRTAPCSVGILIERGALNRNNPLTSVSFYSVGVVFIEGEDDREALAYAMRMANQPNVSVTMVRIMEPRKKNKNMTNRDPNGDLIHRFKVDCIQIKRHDYKEEIARDSVEMINVIKSLEGCFDLILVGRRHECESGLFNGLSEWNEYPELGPMGDMLVASDSTFDGSVLVVQQQKRSGTGYHDLHLDSGFVTRQESLTIVEVPHDRKVWPMV* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2507 761 PANTHER CATION/H + ANTIPORTER 17 134 - -
Mtr5g2507 761 PANTHER CATION/H + ANTIPORTER 239 760 - -
Mtr5g2507 761 PANTHER CATION/H + ANTIPORTER 135 239 - -
Mtr5g2507 761 Pfam Sodium/hydrogen exchanger family 55 154 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr5g2507 761 Pfam Sodium/hydrogen exchanger family 239 381 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr5g2507 761 Gene3D - 234 391 IPR038770 -
Mtr5g2507 761 Gene3D - 47 144 IPR038770 -
Mtr5g2507 761 PANTHER CATION/H+ EXCHANGER 2 135 239 - -
Mtr5g2507 761 PANTHER CATION/H+ EXCHANGER 2 17 134 - -
Mtr5g2507 761 PANTHER CATION/H+ EXCHANGER 2 239 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2507 Mtr-Chr5 32887030 32890412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2507 31 745 Antiporter Super Family AT2G13620 33.792 1.60e-137 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2507 - - mtr:MTR_5g074380 1184.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2507 5 32887030 32890412 Mtr5g2507 5 32887030 32890412 ECH
Mtr3g1783 3 30239899 30243559 Mtr5g2507 5 32887030 32890412 PCT