Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2506 ATGGCTGCAACAAGCGAAAACGCGAACATTACCGGTGTTACACCAAACGGAACGATATGGGCTGGCTTGGTACTAGGTCCATCAGTTTTCGGGCAAAGTGAGCTCATAAAAAAATGGATATTTCCACAAAAAACATTCTTCATTAGCCAGACAATCTCATATTTTGGGATAATGATGTTCTTGTTCTTAATTGGAGTAAAAATCGATCTAAGTCTTGTTACAAGATCAGGGAAAAAAGCTTGGGCAATTGGAACATTTTCATTTTTTGTACCACTATTAATGAGCAATTTCATCGCACGTCTCCTAGGAAAACTACTAATAACCCCCGACCAAATTCTCTGCAAGTCCATATTTGTCCTCGCATTTATCTTTTCAACCGGTTCATTCCACACCACCGCAATCCACTTAGCCGATTTAAAGCTATTGAACTCAGAAATGGGTCGAATAGCGATATCTGCCTCCATGGTTGATGGAGCCTTTTCGTTATTGTGGGTTACTGCTAAACTCACAGAAAAACAATCAAGTTCAGCAGATTTAAAGCACCATCCTTTTACTTGGACGGGAGTTTCTTTGCTTGTTATGGTTATTATCATACTATGCGTTCTTAGGCCTATAATGTTTTGGATGATAAGAAAAACACCTGAAGGAAAACCAATCAAAGAATCATACATATTTTCAGTGTTTTTAATGATATTGGGCTGCTCATTATTTAGTGAGGTTATTGGAGAACATTATATGATTGGTCCTGTAATTTTAGGTCTGGCTGTACCTGATGGGCCTCCATTAGGATCAGCATTGACTGAAAGGTTGGATGCAATTGTGTCAGCGGTTTTCTTGCCATTGTATTTCCTTTTTAATGGTGCTAATTTCAATATTTTTCTAATTAATACTCGTAGCTTTGTAATAGTGCAAATTGTTGCTATATTTGCATCTTTGGGGAAGGTTGCTGGAACTATGTTGCCTTCAATTTATTGGAAGATGCCAGTTACTGATGTTCTATCTTTAGGACTACTTATGAGTGCTCAAGGCATCACACAATTGATTTACTTGCAGACTGCTCTATATCTTCATCTTATAGATGAAGAATCATATGGTATTGGGTTGATAGCTTTAATATGGATAACAGCAGCCACAACACCCATTGTGAAATTCCTATATGATCCATCTAAGAGGTACTTATCCTTAAATAGGAGAAGAACCATTGAACAATCAACTTCAGATATTGAACTTCGTATCTTGGCATGTATACACAGTCAAGAAAACACACCATCCATTATCAATCTTCTTGAAATGTCAAGCCCTTCATTGAAAAATCCAATTTGTTTCTATGTCCTACATCTTATTCAACTTAGAGGACGAGTAACACCAGTTTTCATAGATCATCAACCAACATGCAACAAGGAGAATCCACCGCACTCGACGAGTTATTCACAACACATAATAAATGCTTTTAGATCGTATGAGCAACAAAATTCGAATAATGTGGTTGTGAAACTCTTCACATCGATTTCTCCTTATGAGACGATGCATGATGAGATATGTATGCAAGTTGCTGAGAAGAGAGTTTGTTTGTTGATTGTTCCTTTTCATAGACAGTGGATTCCAAATGAGATTTCAGAGTCAGCAGCCCCGATTCGCGCATTAAACCGTCATCTTCTCAGAAAAGCACCTTGTTCTATTGGGATTTTAATTGAACGCGGCACTTTGAGTAGGAATAATCCTCTGACTAGTGTTTCATTTTTTAGTGTTGGAATTATTTTTATAGAAGGTGCGGATGATCGCGAAGCGTTAGCATATGCGATGCGAATGGCACATCACCCGAACGTAAGGGTCACCTTGGTTCGAATAATGGAGCCTCGAAAGAAAAATAGGAACTTGACCAACAGGGATCCAGACGGCGACTTGATTCATAGGTTTAAAGTAGATTGTATCAAAATTAAACGTCATGATTATAAAGAGGAAATAGCAAGAGATAGTGTTGAAATGGTAAATGTTATAAGGTCACTTGAAGGTTGTTTTGATTTGATTTTGGTTGGTAGAAGACATACAAGTGAGTCAAATTTGTTTAGTGGATTGTCTGAATGGAATGAGTATCCTGAACTTGGTCCTATTGGAGACATGTTAGTGGCTTCAGATTCTACTTTTGATGGTTCTGTTCTGGTGATTCAGCAACAAAAGAAGTCAGGGGTTGGTTATCATGATTTGAATCTAGATTGTGGTATCGTCAAAACAAAGCAAGAACCTGTAACCATTGTGGAAGTACCTAATGATAGAAACGTTCGGCCAATTATTTGA 2295 0.3773 MAATSENANITGVTPNGTIWAGLVLGPSVFGQSELIKKWIFPQKTFFISQTISYFGIMMFLFLIGVKIDLSLVTRSGKKAWAIGTFSFFVPLLMSNFIARLLGKLLITPDQILCKSIFVLAFIFSTGSFHTTAIHLADLKLLNSEMGRIAISASMVDGAFSLLWVTAKLTEKQSSSADLKHHPFTWTGVSLLVMVIIILCVLRPIMFWMIRKTPEGKPIKESYIFSVFLMILGCSLFSEVIGEHYMIGPVILGLAVPDGPPLGSALTERLDAIVSAVFLPLYFLFNGANFNIFLINTRSFVIVQIVAIFASLGKVAGTMLPSIYWKMPVTDVLSLGLLMSAQGITQLIYLQTALYLHLIDEESYGIGLIALIWITAATTPIVKFLYDPSKRYLSLNRRRTIEQSTSDIELRILACIHSQENTPSIINLLEMSSPSLKNPICFYVLHLIQLRGRVTPVFIDHQPTCNKENPPHSTSYSQHIINAFRSYEQQNSNNVVVKLFTSISPYETMHDEICMQVAEKRVCLLIVPFHRQWIPNEISESAAPIRALNRHLLRKAPCSIGILIERGTLSRNNPLTSVSFFSVGIIFIEGADDREALAYAMRMAHHPNVRVTLVRIMEPRKKNRNLTNRDPDGDLIHRFKVDCIKIKRHDYKEEIARDSVEMVNVIRSLEGCFDLILVGRRHTSESNLFSGLSEWNEYPELGPIGDMLVASDSTFDGSVLVIQQQKKSGVGYHDLNLDCGIVKTKQEPVTIVEVPNDRNVRPII* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2506 764 PANTHER CATION/H + ANTIPORTER 19 742 - -
Mtr5g2506 764 Gene3D - 15 393 IPR038770 -
Mtr5g2506 764 PANTHER CATION/H+ EXCHANGER 2 19 742 - -
Mtr5g2506 764 Pfam Sodium/hydrogen exchanger family 17 382 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2506 Mtr-Chr5 32871499 32876312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2506 19 750 Antiporter Super Family AT2G13620 35.348 2.01e-152 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2506 - - mtr:MTR_5g074320 1173.69