Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2502 ATGAAGCATATTATAATCCAAATTGGGAGATGCTTGATGCATACAAAGGTATGGACATTTATTGGCTTCACTTCAGCTGTTGTTGGATTGCTTTGTTATGCTCTCAGTTCTTCCTTTATCCATCTATTTGGAAATTGGAATTGGTTGAAGATATTCCTTTACGGTGTTTTCTGTCTCATCATTTGCTTTCTGATTTTACTAGCAATGATATGGAACCACTCCAGATGTTTCAGGTTTCAAGTTCAATTCGCATTTTTGGTTTTAACCACCACCTCGGTGTATTCCTTTTTCTCCGATAAAATGATTAATGGGAAACCAGATGCATATAGCCTCATTTCAAGTGCTTCCTTTGCTATCATGTCGCTCAGTTTGTCGCGGCAAACTCAGTGCGGATTTGAGGTGGATCTTCTTTACTTTTTTCTCGGATGTTTAATTGTACAACTAATGAAGATTAAATTGCAGTTATTCATTGTTGGAGCTGGTTTCAGTTATTCCCTTATTATTATTCGTTCTTACTTTCCTTCAACTCCCATAGATGTTGGACCAGAAAACGAGTGCCCCGAAATCCAAGATGAAAATTCAGTAGTTCTTCATGTCATTTCTCTAGACTTAGCTAGTAATGACATCGCTAGCAGCCTGATGGAACAGCTCAGGACCAGTATGAAGGCGCTTCAGCTGGAAAATTTGCATATCGTCGACATGCTTTTGGAGCAGGAAAAGGAATATTTTGACAATGCACCGTCGATGTTATCCGAATGTAGCTTGGAAGGAACGCTCATGTTGGAAGCGCTGTCGCTGGAAACGGTCAACAACCTTCAGGAAACTGTAAAATTGATGTTAAACTCTGGTTTCAACAAGGAGTGCTTAATTGTGTATAGCAGTTGCCGGAGGGAATGCTTAGAGGAGTGCCTGGTAAAACAATTCTTAAATTCAGATAATCTTACTATCAAGGATGTTAACATGGAAGATCTCGGACTACGTATCAAAAGATGGATTAAGGCTTTCAAGGTTGCATTCAAGATATTGTTTCCCACCGAGCGGCAACTCTGCGATATTGTTTTCTTTGAGTTCTCTGCCATCTCCGATATATCTTTTACAGATGTTTGTAGGGAATTCACCATTCGATTGCTGAATTTTCCCAATGTCATAGCGAATGATCAAAGCAATACGACACTGTTGTTTAGAATGCTCGACATGTATGAAACATTGCATGACCTAATTCCGAATTTCGAGTCTCTGTTTTGTGATCAATACAGTGTGTCACTAAGGAATGAATTAAACACAGTTTTAAAGAAATTGGGAGAAACAATAGTGGGCACTTTAAGGGAGTTTGAAAATACAATTCGCAGCAAAGGTCCCGGGAACGCGCCATTTTTTGGTGGCCAGCTTCACCCCCTTGTCCGTTTCGTCATGAATTTCCTAACCTGGATATGTGACTATCGTGAGATATTAGAGCAGGTGTTTGAAGATCATGGACATGTGTTGCTGGAATACACCAAGCATGATGATACTGTACCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACTGCAGATGGAACGGATTATGGAGGTGTTGGAGAGTAAGTTGGAAGCTATGTTCAATATCTTTAATGACCCTACTTTGGGTTATGTTTACTTAATGAATAGCAGCAGGTACATAATTATAAAGACGATGGAAAATGAATTAGGAACTCTTTTAGGGGATGGTATGTTGCAAAGACACAGCGCGAAATTACGATACAACTTTGAGGAATATATCAGAAGCTCGTGGGGTAAGGTGCTGGAATTTCTAAGGCTGGACAACAATCTATTAGTGCATCCTAATATGGTTGGGAAGTCAATGAAGAAGCAGCTCAAATCTTTCAACAAACTGTTTAATGAAATATGCAAAGCTCAATCCTTGTGGTTTATCATGGACGAAACGTTAAAGGAAGAAATAATAGTTTACCTTGGGGAAAACTTGTTGCCAGCTTATACAAACTTCATTCGGAAGTTACATATTGTTCTAAAACTGGAAGTTAAAAAGCCCCCTGATGGATACATTGAGTATGAAACGAAAGATATTAAAGCAATACTCAACAATATGTTTAAGATATACCGTCCATCAAGTTGTGGCCGAAAACGAGGTTAA 2145 0.3893 MKHIIIQIGRCLMHTKVWTFIGFTSAVVGLLCYALSSSFIHLFGNWNWLKIFLYGVFCLIICFLILLAMIWNHSRCFRFQVQFAFLVLTTTSVYSFFSDKMINGKPDAYSLISSASFAIMSLSLSRQTQCGFEVDLLYFFLGCLIVQLMKIKLQLFIVGAGFSYSLIIIRSYFPSTPIDVGPENECPEIQDENSVVLHVISLDLASNDIASSLMEQLRTSMKALQLENLHIVDMLLEQEKEYFDNAPSMLSECSLEGTLMLEALSLETVNNLQETVKLMLNSGFNKECLIVYSSCRRECLEECLVKQFLNSDNLTIKDVNMEDLGLRIKRWIKAFKVAFKILFPTERQLCDIVFFEFSAISDISFTDVCREFTIRLLNFPNVIANDQSNTTLLFRMLDMYETLHDLIPNFESLFCDQYSVSLRNELNTVLKKLGETIVGTLREFENTIRSKGPGNAPFFGGQLHPLVRFVMNFLTWICDYREILEQVFEDHGHVLLEYTKHDDTVPSSSSSSSSSSSSSSLQMERIMEVLESKLEAMFNIFNDPTLGYVYLMNSSRYIIIKTMENELGTLLGDGMLQRHSAKLRYNFEEYIRSSWGKVLEFLRLDNNLLVHPNMVGKSMKKQLKSFNKLFNEICKAQSLWFIMDETLKEEIIVYLGENLLPAYTNFIRKLHIVLKLEVKKPPDGYIEYETKDIKAILNNMFKIYRPSSCGRKRG* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2502 714 Gene3D Exocyst complex component Exo70 205 706 - -
Mtr5g2502 714 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 23 701 - -
Mtr5g2502 714 Pfam Exo70 exocyst complex subunit 329 698 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr5g2502 714 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 701 IPR004140 GO:0000145|GO:0006887
Mtr5g2502 714 SUPERFAMILY Cullin repeat-like 257 701 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2502 Mtr-Chr5 32797435 32799804 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2502 259 712 EXO70 exocyst subunit family AT5G58430 44.420 1.42e-113 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2502 - - cam:101502613 780.785