Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2499 ATGAAAGTACACATGGTCATCAAAATTCAGAGGTGGCTGATGCAGACAAAGGTATGGAGATTTGTGGGCTTTGCTTCAGCTGCTGTTGGACTGCTTTGTTATGCTCTAAGCTCTTCCTTTAACTATCTATTTGGAAACTGGAATTTGTTGAAGATAATTCTTTACACTGTTTTCAGTTTCATCATTTGCATCATGATTTTGTATGAAAATATATGGAAACAGTCTAGAAGTCTTCGGTTCAAAGCTCATACAGCTTTTTTAGTATTGACAATCACCTCTGTCTATTCATTTTACTTCGATAAAGTGGTAAATGGAAAACCAGATGCTTATAGCCTCATTTCTTGTGCTGCCTTTGCTATCATGTCACTGAGTTTCTCGAGGCAATCTCAGTGTGGATTCGAAGTGGATCTTCTTTACTTTTTTCTCGGATGTCTAACTGTGTTACTCATGAAGATTAAATTGGAGTTATTCATTATTGGAGCAGGTTTGAGTTACTCCCTTCTCATTTTTCGTTCTTCCTTTTCATCTGTAGAAGAAATTGGATTATCTGAATTCCAAGATGAAAATTCAGTAATTATTGATGTAGATTCGCCACATCTAGCTAACGCTGATATTGCTAGTACGATTGAACAACTAAAAAATTATCTTAACTTGCTACAGCAGAAAAATCTGAACCTCGTTGACATGCTTTTGAAGCATGTGAATGAATATGATGACTCTGAAATTATGTTGCCCAGCCTTAATTTCATGATCGATGAGTTGCCTTCAGATTTAATCAACTACCTTCATGAAACCGCGAAGTTCATGGTAAGTGCTGGGTTTGAGGAAGAGTTTTCTAATGTATACATCAATTGTAGAAGGAAATGTTTGGAGGAGTGTCTAATAAATAGATTATTCGGCTTGCAGCAGATTAACATCATGAATGAAAATCAAAGGGTGAAATATGTAGATAATGTGATTAAAAAGTGGATCACAGCATCAGAAATCTCTCTGAAGATTCTATTTCCATTTGAACAACGACTCTGTGATCATGTCTTTTCAGGTTTCGCTTCCTCTGCTACTCGTTGTTTCACAGAGGTTTTCCACGGAGCAACGTTTCAGCTTCTGAATTTCGCTGATGCAGTTGCTGATGGAAGCCCTTCCATTTGGTGTTTATTCAAAATGCTCGCAATCTTTGAGACATTGCATCATTTGATATCGAAATTCAACTTGGGTCCTGATTCTTCGGTGAAGGAAGCTGCAGTTAGAGTCCAAAACAGATTAGGAGAAGCAATCAGGGACCTTTTCTTGAAACTAAATTATCTGACTTTCCGTGTCCCAGCAGCAAAGAAAGTTGCTCGGTCTGATGGACGACATCATCCAATGGCAGTCCAGATCATTAGCTACGTCGCTTCTGCTTGTAGGTCACGCCACACGCTAGAACAAGTTTTGCAGGAATATCCCAAGGTGAATAATGGAGTAGTGCTGAAAGATTCTTTTATAGAACAGATGGAATGGATAATGGATATGTTAGAGAAAAAATTGAATGGTAAATCCAAAGAGTACAGAGACCTTGCTTTGCGCAATCTTTTCATGATGAATAATAGGAGGCACATAGAAGATTTACTTAAAAGGTGGGATTTGGAAACCGTATTTGGCAACGATTGGTTCCAGAAAAATCAAGCAAAATTCCAACAAGACCTTGATCTTTATATAAAAAAATCCTGGATCATGGTGTCTGAGTTTTTGAAGTTGGACAACAATGACTATGCGGCACTCAATGACGATGTTGCAGAAGATATATTGAAAGAAAAGCTAAAATTGTTCAACAAGCAATTTGAAGAGATGTACAGAGTTCAGTCCAATTGGTTTGTATATGATAAGAAGCTTAAGGAAGAAATAATAATATCAGTGGGAAATACCTTGCTGCCAGTATATGGAATCTTTATTGGGAGGTTCCGTGATTGTCTTGGTATTCATGCAAATCAGTATATTAGATATGGAATGTTTGAGATTCAAGATCGCCTTAACAATTTGTTTCTGATGAAAAACAGTTAG 2037 0.3716 MKVHMVIKIQRWLMQTKVWRFVGFASAAVGLLCYALSSSFNYLFGNWNLLKIILYTVFSFIICIMILYENIWKQSRSLRFKAHTAFLVLTITSVYSFYFDKVVNGKPDAYSLISCAAFAIMSLSFSRQSQCGFEVDLLYFFLGCLTVLLMKIKLELFIIGAGLSYSLLIFRSSFSSVEEIGLSEFQDENSVIIDVDSPHLANADIASTIEQLKNYLNLLQQKNLNLVDMLLKHVNEYDDSEIMLPSLNFMIDELPSDLINYLHETAKFMVSAGFEEEFSNVYINCRRKCLEECLINRLFGLQQINIMNENQRVKYVDNVIKKWITASEISLKILFPFEQRLCDHVFSGFASSATRCFTEVFHGATFQLLNFADAVADGSPSIWCLFKMLAIFETLHHLISKFNLGPDSSVKEAAVRVQNRLGEAIRDLFLKLNYLTFRVPAAKKVARSDGRHHPMAVQIISYVASACRSRHTLEQVLQEYPKVNNGVVLKDSFIEQMEWIMDMLEKKLNGKSKEYRDLALRNLFMMNNRRHIEDLLKRWDLETVFGNDWFQKNQAKFQQDLDLYIKKSWIMVSEFLKLDNNDYAALNDDVAEDILKEKLKLFNKQFEEMYRVQSNWFVYDKKLKEEIIISVGNTLLPVYGIFIGRFRDCLGIHANQYIRYGMFEIQDRLNNLFLMKNS* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2499 678 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 674 IPR004140 GO:0000145|GO:0006887
Mtr5g2499 678 Coils Coil 494 521 - -
Mtr5g2499 678 Gene3D Exocyst complex component Exo70 189 678 - -
Mtr5g2499 678 SUPERFAMILY Cullin repeat-like 207 673 IPR016159 -
Mtr5g2499 678 Pfam Exo70 exocyst complex subunit 321 670 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr5g2499 678 PANTHER PROTEIN, PUTATIVE-RELATED 9 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2499 Mtr-Chr5 32767625 32770040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2499 235 673 EXO70 exocyst subunit family AT5G58430 44.812 1.02e-100 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2499 - - mtr:MTR_5g074130 1332.39