Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2497 ATGATACCGCTGATCATCCAAATTCGGTGTTGGCTGTTGGAAACAAAAGTGTGGAGATTTGTAGGCTTTGTTTCCGCTGCTGTTGGACTGATTTGTTATGCTCTAAGCTCTTCTTTCAACCATCTATTTGGAAATTGGAATTTGTTGAAGGTAATTCTTTATACTCTTTCCAGTTTCATCATCTGCCTCCTGATTTTGTATGCAAATACATGGCAAAACTCTAGAAGTCTTCGGTTCAAAGCTCATACAGCTTTTCTAGTATTGACAATCACTGCTGTCTATTCATTTTTCTCTGATAAAATTATGAATGGAAAACCAGATGCATATACTCTAATTTCGTGTACTTCTTTTTCTATGATGTCACTTAGCTTGTCGAGGCAAATTCAGTGTGGATTTGAAGTTGATCTTATGTACTTTTATCTAGGATGTTTAATTGTACAACTCATGAAGATTAAATTGTCGTTAGCTATTGTTGGAGTTTGTTATAGCTACTGTGTTATTATTCTTCGGTCTTCATTCTCTTCCTTAAATGTTACACAAGAAACTCAATGTCTTGGACTTGAAGAACAACATGTGATCATTCAAGTTGATTCACAACATAAAAATACCAATAGTCATGACAACATCATGCAAGAGTTCATGACTTGTATGAACGAGCTTAAGCAGAACAATTCAAATATTGCCAATAAGTTTTTGGAGAAGGTAAAAGGGAACGGTAAATTGGTAGTGACTGATCACAACTTCATAATTGATGCCCTGCCAAATGAAACAATCAATCATCTTCATAAAACCGTGAAAATGATGGTGGATGCTGGGTTTGAGAAGGAGTGCTCTGATTTGTACATTAGTTTGCGTAAAGAATGGTTGGAAGATTTGTTAATAAATAAATTATTAAGGTTGGGAAAAATGGGATTTCAGGATTACATGCTTGGAAGATGGATTAAAGCTTCTAAGGTATGTCTTAAAATACTATTTCCAAGTGAGCGTCGACTCTACGATCGTGTCTTCTCAGAATCAACCAATGAAGCATCTAATCTTTGTTTCTTGGAGGTTTGTTATGGAGCGACGATACAACTTTTGAATTTCGCAGATTTGTTTGTCAATCAAAGTCCTTCAACGTGGCGTTTATTTAAACTCATTAGCATGTTTGAGACGTTGCGCGATCTGATTCCTGAGTTTGAATCATTGTTTCCAAGTTCGTTGGTGAACGAAGTAATACAAATAAAGAATAGATTGGGTGAAGTTATTTCAAGTGAAGATAATTCCCCCTCATCAATTGAAGAGATGCAAATTTAG 1296 0.3549 MIPLIIQIRCWLLETKVWRFVGFVSAAVGLICYALSSSFNHLFGNWNLLKVILYTLSSFIICLLILYANTWQNSRSLRFKAHTAFLVLTITAVYSFFSDKIMNGKPDAYTLISCTSFSMMSLSLSRQIQCGFEVDLMYFYLGCLIVQLMKIKLSLAIVGVCYSYCVIILRSSFSSLNVTQETQCLGLEEQHVIIQVDSQHKNTNSHDNIMQEFMTCMNELKQNNSNIANKFLEKVKGNGKLVVTDHNFIIDALPNETINHLHKTVKMMVDAGFEKECSDLYISLRKEWLEDLLINKLLRLGKMGFQDYMLGRWIKASKVCLKILFPSERRLYDRVFSESTNEASNLCFLEVCYGATIQLLNFADLFVNQSPSTWRLFKLISMFETLRDLIPEFESLFPSSLVNEVIQIKNRLGEVISSEDNSPSSIEEMQI* 432
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2497 431 Pfam Exo70 exocyst complex subunit 312 418 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr5g2497 431 PANTHER PROTEIN, PUTATIVE-RELATED 9 410 - -
Mtr5g2497 431 Gene3D Exocyst complex component Exo70 187 419 - -
Mtr5g2497 431 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 410 IPR004140 GO:0000145|GO:0006887
Mtr5g2497 431 SUPERFAMILY Cullin repeat-like 193 417 IPR016159 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr5g2497 Mtr-Chr5 32707704 32709248 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2497 243 416 EXO70 exocyst subunit family AT5G58430 51.053 6.95e-47 169
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2497 - - mtr:MTR_5g073960 860.907