Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2496 ATGATACCCGTGATCATCCGAATTCGGATGTGCCTGTTGCAGACAAAAGTGTGGAGATTTGTGGGCTTTGCTTCAGCTGCTGTTGGATTGCTCTGTTATGCTCTCAGCACTTCCTTCAACCATCTATTTGGAAATTGGAATTTGTTGAAGATATTTCTTTACACTCTTTTCAGTTTCATCATGATTTTGTATGCAAATATATGGAAAAACTCTAGAAGTCTTCGGTTCAAAGCTCATACAGCTTTTTTAGTATTGACAATCACCTCTGTCTATTCATTTTTCTTTGATAAAGTGGTGAATGGAAAACCAGATGCATATAGCTTGATTTCATGTGCCGCCTTTGCTATCATGTCAATGAGCTTGTCAAGGCAATCTCAGTGTGGAATCGAAGTGGATCTTCTTTACTTTTTCCTTGGATGTCTAATTATGCAACTCATGAAGATTAAACTGCAATTAGTCATTGTTGGAGCAGGTTTCAGCTATTCTCTTATTATTATACGTTCTTCGTTATCTTCCACAAATTCCGTACCGGAAAATGAGTATTTTGGAGTTGGACTCCGCGGTGAAAATTCAGTAGTTATTGAAATGGATTCACTACTAAGGCCCAGTAATGATATTTATTCTGGAATGATGCAACAACTTACGACTTGTATAAATGCACTTCAACAGGATAGTTTGAATATCATTGACAGGCTAATGGAGGAATACAATCAAGGTAAGTGTGATTTTGAAATGGATACTCTGCCGTCAGAAAAGCTACATAATCTTCATGAAATTGTGAAGTTGATGCTATGTGCTGGGTATGAGAAAGAGTGCTCTGCTGTGTACATCAGTTGGCGGAAGGTACTCTTGCAGAAGGGTCTACTAAATAAAATATTTGTGTTGCCGGAGGCAAAGATCAACACCGAGCGTGAAAGAGAGCGATACTTAGATACCATGTTTCAAAGATGGATGACTGCTTCTGACATAGCTACGACGGTTTTGTTTCCAATTGAACAAAAATTCTGCGATCTTGTCTTCTCAGGGTTCTCCTCTGCCACTTCTCATTGTTTCATTGAGATTTGCCAAGAAGCAACGTTTCAGCTGCTCAACTTTGCAGATGTGACACTACTACAATAA 1119 0.387 MIPVIIRIRMCLLQTKVWRFVGFASAAVGLLCYALSTSFNHLFGNWNLLKIFLYTLFSFIMILYANIWKNSRSLRFKAHTAFLVLTITSVYSFFFDKVVNGKPDAYSLISCAAFAIMSMSLSRQSQCGIEVDLLYFFLGCLIMQLMKIKLQLVIVGAGFSYSLIIIRSSLSSTNSVPENEYFGVGLRGENSVVIEMDSLLRPSNDIYSGMMQQLTTCINALQQDSLNIIDRLMEEYNQGKCDFEMDTLPSEKLHNLHEIVKLMLCAGYEKECSAVYISWRKVLLQKGLLNKIFVLPEAKINTERERERYLDTMFQRWMTASDIATTVLFPIEQKFCDLVFSGFSSATSHCFIEICQEATFQLLNFADVTLLQ* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2496 372 Pfam Exo70 exocyst complex subunit 315 367 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr5g2496 372 Gene3D Exocyst complex component Exo70 190 370 - -
Mtr5g2496 372 PANTHER PROTEIN, PUTATIVE-RELATED 9 368 - -
Mtr5g2496 372 SUPERFAMILY Cullin repeat-like 215 369 IPR016159 -
Mtr5g2496 372 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 368 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2496 Mtr-Chr5 32698916 32700090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2496 242 368 EXO70 exocyst subunit family AT5G58430 40.458 8.43e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2496 - - mtr:MTR_5g074130 431.024