Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2494 ATGACTGTAGACATGCTCGTCCAAATTCAGAGGTGGCTGATGCATACAAAGGTATGGAGATTTGTTGGATGTGCTTCAGCTGTTGTTGGACTTGTTTGTTATGCTCTCAGCTCTTCCTTCAATCATCTATTTGGAAACTGGAGATTGTGGAAGATAGTTCTTTACACAGTTTTCAGTTTCATCATCTGCTCCATAATTTTGTATGCAAGAACATGGCAACACTCGACTAGTCATCGATTCAAAGCTCATTCAGCGTTTCTGGTATTGACAATTACCTCTATTTATTCCTTTTTCTCAGATAAAATTATGAATGGAAAACCAGATGCATATAGTCTAATTTCATGTGCTGCCTTTTCTATGATGTCACTTAGCTTGTCGAGGCAAATTCAGTGTGGATTTGAAGTGGATCTTATGTACTTTTATCTCGGATGTTTAATTGTACAACTCATGAAGATTAAATTATTGTTAGCTATTGTTGGAGTTTGTTATAGTTAGTGTCTTATTATTCTTTGTTCTTCTTTCTCTTCCTCAAATATTACACAAGAAACTAGGTGTGTAATTGGACTCGATGAACGTGTAGTCATTCAAGTTGATTCACAACAACAAGAAAATCCGATTAGAGGTTTCAACATTAAGCAACAGTTCATTTCTTGTATGAATGAACTTAAGAAAAACAATTCGAATATTGGTAAGATGCTTTTGCAAAAGCTTAAAGGTAACTATAAATTGGTTATGACTGACCAAAATTTCATAATTGATTCACTTTTGCCTGAAACAATTAATAACCTTCATAACACGGTGAAATTGATGGTGGATTCTGGATTTGAGAAAGAGTGCTATGAGATTTACAACAGTTACCGTAAGGAATGGTTGGAAGACTTGTTAATAAATAAATTATTGGCGTTGAGAAAGATGGAATTTCAGGATTACATGATTGGAAGATGGATAAAAACTTCCAAGGTTGCTCTTAGAATACTATTTCCCAGTGAACGTCAACTATATGATGGTGTCTTCTCAGAATTCAACTCTGAATCATCTGATCACTATTTCTCAGATGTTTGTCATGGAGCGATAATTCAACTTCTGAATTTTGCTGATTCGTTTGCAAATCGAAGCCCTTCACCATGGCGTATGTTTAAAATCCTCAACTTGTTCGAGACACTGTGTGATCTGATTCATGAATTTGAATCATTGTTTCTTGATTCGTTGGTGAACGAAGCAGTAAAAATCAAGAATAGATTGGGTGAAATAAGTAAAGACATTTTCATGGAATTTGGGAATATGATCTTTCTTACACCATATGTGGAGTTAGATTGTTGGGCTGATGGTGGAGTACATCCAATGACATGTGAGGCCACTAGCTCCATCGTCGCGGCTTTTTGGTCAAGACAAAATCTGGAGAAAATTTTACAAGGGTACCCCTTAGTTGTTGATGGAGCAGGAACATCTTTATTTTATTCACAAATGGTGCTTATTATGGAGCAGTTTGAGAGAAAATTGGAAGCCAAGTCAAAATATTATGAGGACCCTGCTTTGCGCTATTTTTTCTTGATGAACAATCTATGTCACATTAAGGGAAGATTGGAAACCTTTTGGGATAATAGCATTCATACAAACACGGAAATTCTTTGA 1632 0.3566 MTVDMLVQIQRWLMHTKVWRFVGCASAVVGLVCYALSSSFNHLFGNWRLWKIVLYTVFSFIICSIILYARTWQHSTSHRFKAHSAFLVLTITSIYSFFSDKIMNGKPDAYSLISCAAFSMMSLSLSRQIQCGFEVDLMYFYLGCLIVQLMKIKLLLAIVGVCYS*CLIILCSSFSSSNITQETRCVIGLDERVVIQVDSQQQENPIRGFNIKQQFISCMNELKKNNSNIGKMLLQKLKGNYKLVMTDQNFIIDSLLPETINNLHNTVKLMVDSGFEKECYEIYNSYRKEWLEDLLINKLLALRKMEFQDYMIGRWIKTSKVALRILFPSERQLYDGVFSEFNSESSDHYFSDVCHGAIIQLLNFADSFANRSPSPWRMFKILNLFETLCDLIHEFESLFLDSLVNEAVKIKNRLGEISKDIFMEFGNMIFLTPYVELDCWADGGVHPMTCEATSSIVAAFWSRQNLEKILQGYPLVVDGAGTSLFYSQMVLIMEQFERKLEAKSKYYEDPALRYFFLMNNLCHIKGRLETFWDNSIHTNTEIL* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2494 542 Gene3D Exocyst complex component Exo70 197 535 - -
Mtr5g2494 542 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 531 IPR004140 GO:0000145|GO:0006887
Mtr5g2494 542 PANTHER PROTEIN, PUTATIVE-RELATED 9 531 - -
Mtr5g2494 542 Pfam Exo70 exocyst complex subunit 313 526 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr5g2494 542 SUPERFAMILY Cullin repeat-like 213 529 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2494 Mtr-Chr5 32688161 32696020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2494 244 523 EXO70 exocyst subunit family AT5G58430 46.780 4.06e-64 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2494 - - mtr:MTR_5g073960 595.119