Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2491 ATGAAGCATATTCTATTCCAAATTTGGAGATGGATGATGCAGCCAAAGGTGTGGAGATTTCTGGGATTTGCTGCAGCTGTTGTTGGACTGCTTTGCAATGCTCTCAGTTCTTCCTTCAACTATCTCTTTGGAGATTGGAATTTGTTCAAGATAATTCTCTATACTGTTTTCAGCTTCATCATTTGTGTGTTAATTTTATTTGCCGCAAGGATATGGCAACACTCAAGAAGTCGTTGGTTCCAAGCGCATACAACATATGTTGTATTGGCAATCACGTCGCTATATTCATATTTTTTCGATAAGTTAATGCATATAACACCAGATGCATATAGTCTCATTTCATGTGCATCCTTTGCTGTCACGGTGCTTAGTTTGTCGAGGAACAAAACTCAATGCGGATTTGAAATCGATCTTCTATATTTTCTTCTAGGATGTCTAATGATGCAACTCATGAAGATTAAATTGAAATTATTCATTCTTGGAGCAGTTTTTAGCTATTTTCTTATTATTCTCCGTTCATCCTTTTCTTCAATAGATGCTAGAGAAAATAAACAATACTCTGAATTCCAAGATGGAAATTCAGTGGTTCTTGATATGGATTCTCTACAACTGGCGAGTACTAATACTTCAAGTGCTATCAATAGCATGGATTCACAACAATTGGTGATCAGTAGTACAGATATTGGCAGTATGATAGAAAAATTGGAGACTTGTGTGAAGGAGCTTAAGCACCAAAATTCAAAGTTCATTCAAATTCCTTTAGGGCATGCAAAAAAATATGAACACTCTCAATTGGTGCTGGTGAATCCCAACTTCATGACAAACATGCTGAACAAAGAACCTATCAAAGACCTTGAGGAGAAAACAAATCTTATGGTGAACGGCGGGTTTGAGAAGGATTTTTCCTATGTGTACAACAATTGTTGTAGGGAATCTTCCACAGCCTCTTACAATATAATTTTCCTTCACGAGCGAAGACTCTACAATCACATCTTCTTCGGGTTCTCACCCGCCTCTGATTTCCCCTGGGGATCCAACATTCAACTTTTGAATTTTGCTGATTATGTGGTCACCAGAGTCCGTTTGCCTGAGCAACTATTTAAAATCCTCGAGATGTTAGAAATAATGTGCGACCTAATTCTAGAATTTGAATCCTTGTTTTATTATCAGTTCAATGTGTCTCTCAAGAAAGAACAACCGGCGAAATGGAAGAAATTAGGGGAAACAATCAAAAGAATTTCCATGGAGTTGGAGTATGTCTGCAATACAGCTGACCCAACTACAAGTTGA 1290 0.3752 MKHILFQIWRWMMQPKVWRFLGFAAAVVGLLCNALSSSFNYLFGDWNLFKIILYTVFSFIICVLILFAARIWQHSRSRWFQAHTTYVVLAITSLYSYFFDKLMHITPDAYSLISCASFAVTVLSLSRNKTQCGFEIDLLYFLLGCLMMQLMKIKLKLFILGAVFSYFLIILRSSFSSIDARENKQYSEFQDGNSVVLDMDSLQLASTNTSSAINSMDSQQLVISSTDIGSMIEKLETCVKELKHQNSKFIQIPLGHAKKYEHSQLVLVNPNFMTNMLNKEPIKDLEEKTNLMVNGGFEKDFSYVYNNCCRESSTASYNIIFLHERRLYNHIFFGFSPASDFPWGSNIQLLNFADYVVTRVRLPEQLFKILEMLEIMCDLILEFESLFYYQFNVSLKKEQPAKWKKLGETIKRISMELEYVCNTADPTTS* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2491 429 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 318 423 - -
Mtr5g2491 429 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 24 320 - -
Mtr5g2491 429 Gene3D Exocyst complex component Exo70 186 429 - -
Mtr5g2491 429 SUPERFAMILY Cullin repeat-like 269 419 IPR016159 -
Mtr5g2491 429 PANTHER EXOCYST COMPLEX PROTEIN EXO70 318 423 IPR004140 GO:0000145|GO:0006887
Mtr5g2491 429 PANTHER EXOCYST COMPLEX PROTEIN EXO70 24 320 IPR004140 GO:0000145|GO:0006887
Mtr5g2491 429 Pfam Exo70 exocyst complex subunit 317 418 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2491 Mtr-Chr5 32670967 32672805 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2491 246 429 EXO70 exocyst subunit family AT5G58430 34.222 1.74e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2491 - - mtr:MTR_5g073810 843.188