Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2490 ATGCCAGAGGCCAAGTTAGCTGCTCCGGCGGATGGTGGGCATCATCCTATGATGGCGAAAATTTTGGCCTATCTTCTTTTTGCTATAAGATCACAACATATCGAAGTTGTTAATGGAGACAGAACATTTTCAATACAAACTGAGGGGACAATGGAACTTTTAGAGAGCATATTAGCATCAAAGTCCGAAGAATATGCGGACCCTTCTTTGCGTCATTTTTTCATGATGAATAATTGGAAATATTTAGAAGTGACAAATAGACCACGTAATATGGATGCAGTTTTTGGCGATGATTGGTTACAAAAAATCAGAGCAAAGGTCCAACAAAACATTGAACTCTATCAAAGAAACTCATGGGATAAGGTGTTAGAATTTTTGAAGTTGGATATCAATGATTCCATGGAAGTTAATTTTGTAGTAGATTTGATTAAAGAAAAGATTAGTTTGTTTAACAAGCACTTTACAGAGACATGCAGAGTTCAGTGCACATGGTCCATTCATTATTATAAGCTAAGGAAAGAAATGATTGAATCTCTCAAGAATACCTTGCTCCCAGCGTATGGAATCTTCATTGGGAGGTTTCAGGATTTTCTTAAAACTGATGCTTATGAGTATATTGAGTATGGAATGTTTGACATTCATGACATACTTGATAATTTGTTTCTTGGAAACAAGAAAGACAAATGA 687 0.3566 MPEAKLAAPADGGHHPMMAKILAYLLFAIRSQHIEVVNGDRTFSIQTEGTMELLESILASKSEEYADPSLRHFFMMNNWKYLEVTNRPRNMDAVFGDDWLQKIRAKVQQNIELYQRNSWDKVLEFLKLDINDSMEVNFVVDLIKEKISLFNKHFTETCRVQCTWSIHYYKLRKEMIESLKNTLLPAYGIFIGRFQDFLKTDAYEYIEYGMFDIHDILDNLFLGNKKDK* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2490 228 PANTHER EXOCYST COMPLEX PROTEIN EXO70 10 221 IPR004140 GO:0000145|GO:0006887
Mtr5g2490 228 Gene3D Exocyst complex component Exo70 3 228 - -
Mtr5g2490 228 SUPERFAMILY Cullin repeat-like 9 221 IPR016159 -
Mtr5g2490 228 Pfam Exo70 exocyst complex subunit 39 218 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr5g2490 228 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 10 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2490 Mtr-Chr5 32664149 32664835 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2490 4 228 EXO70 exocyst subunit family AT5G58430 39.662 3.50e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2490 - - mtr:MTR_5g073780 467.618