Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2484 ATGGCACATATTCTAATCCAAACATGGAGATGGATGATGCAGCCAAAAGTGTGGAGATTTGTGGGCTTTGCTTCATCTGCTATTGGACTGCTTTGTTATGCTCTAAGCTCTTCCTTCAACTATCTCTTTGGAGACTGGAATCTGCTGAAGATAATCCTCTACAGCATTTTCAGCTTCATCATCAGCTTGGTGGTTTTGTTTGCAAGGATGTGGCAAAACTCGAGAAGTCTTCGGTTCAAAGCTCATGCTGCGTTTTTGGTATTGACAATCACCTCATTATATTCATTTTTCTTTGATAAAGTAGTTAATGGAAAACCAGATGCATATAGCCTCATTTCATGTGCTTCCTTTTCTATCATGTTAATGAGTTTGTCACGGCAAACTCAATGCGGATTTGAAGTCGATTTTCTTTACTTTTTTCTCGGATGTTTAATTGTGCAACTCATGAAGATTAAATTGCAGTTATTCATTGTTGGAGCAGGTTTTAGCTACTTTGTTATTATACTTCGTTCTTCTTTCTCGTCTATAGATTTTGTTATAGATAATGAACATCCTACTGGTTTAGAAAATGAAAGTAGGATCGTTATTGAAGTCCATTTACAATCACCACAGTTGGGCAGTACAGATATTGGTAGTAGTATGGTGGAACAACTTTCTAATTACATGAAGGCACTTCAGGAAGAAAATTCAAATCTCATCGAAATGCTTTTGGAGAAGTTGAAAGAATACTGTAATGATGATTCTAGATTTAATGTGTCTGACCCCGACTTAATGATCAAGGCCTTGCCAACTGAAACAGTGGACAACATTCATAAAACTGCGAAGTTGATGGTTAGTGCCGGGTTTGAGAAGCACTTCTCGGACATGTATATCAGTTGCAGGAGAGAATGTTTGGTAGAAAGCTTATCAAGATTAGGGCTCAAGAAACACAATGTTGAAGATGTTCAGATGTTGTCATGGAAGGAACTTGAAGAAGAGATTGAAAGATGGATTAAAACATCCAACGTGGCTTTGAAGATATTATTTCCCACTGAACGGAAACTTTGTGATCGGGTTTTATTTGGGTTCTCCTCCACTGCTGATTTATCCTTCACGGATGTTTGCAGGGAATCCACACTTCAGCTGCTGAATTTTGCCGATGCTATTGCTAATGGAAGCCGATCACCTGAGCGGCTGTTTAGAGTCATTGACATGTTTGAAACATTGTGTGATTTAATTCCTGAGTTTAAATCCGTGTTTCGTGATCAATACACTGGGTCGCTGCAAAACAAAGCAACAACAATTTGGAAGAGATTGGGGGAAGCAGTTGGAGGCATTTTCAAGGAGTTGGCGAATTTGATTCGCCAAGATCCGGCAAAGGCAGCAGTTCCCGCTGTTGGACTTCACCCGATTACCCATTACGTGATGAACTACCTTCATGCTGATTGTCAGTCACGGAAGGTGCTGGAGCGAGAGTTTGAAGAAGATTATGGGTATCCGTTGAACGAATATCCAAAAATTGAGGATAGAGTGCATTCCACTTCCTCTCTATCAGTGAAGATGGGTTTGATTATGGAGCTATTAGAGAGCAGTTTGGAAGCCAAATCCAAAATCTACGAGGACCCTACTTCAGTGCTATGTTTTCCAGATGAATTACAGCAGGTACAGTGCTCAAAAGGCTGA 1662 0.4001 MAHILIQTWRWMMQPKVWRFVGFASSAIGLLCYALSSSFNYLFGDWNLLKIILYSIFSFIISLVVLFARMWQNSRSLRFKAHAAFLVLTITSLYSFFFDKVVNGKPDAYSLISCASFSIMLMSLSRQTQCGFEVDFLYFFLGCLIVQLMKIKLQLFIVGAGFSYFVIILRSSFSSIDFVIDNEHPTGLENESRIVIEVHLQSPQLGSTDIGSSMVEQLSNYMKALQEENSNLIEMLLEKLKEYCNDDSRFNVSDPDLMIKALPTETVDNIHKTAKLMVSAGFEKHFSDMYISCRRECLVESLSRLGLKKHNVEDVQMLSWKELEEEIERWIKTSNVALKILFPTERKLCDRVLFGFSSTADLSFTDVCRESTLQLLNFADAIANGSRSPERLFRVIDMFETLCDLIPEFKSVFRDQYTGSLQNKATTIWKRLGEAVGGIFKELANLIRQDPAKAAVPAVGLHPITHYVMNYLHADCQSRKVLEREFEEDYGYPLNEYPKIEDRVHSTSSLSVKMGLIMELLESSLEAKSKIYEDPTSVLCFPDELQQVQCSKG* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2484 553 Pfam Exo70 exocyst complex subunit 328 536 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr5g2484 553 Gene3D Exocyst complex component Exo70 206 541 - -
Mtr5g2484 553 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 541 IPR004140 GO:0000145|GO:0006887
Mtr5g2484 553 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 25 541 - -
Mtr5g2484 553 SUPERFAMILY Cullin repeat-like 216 538 IPR016159 -
Mtr5g2484 553 Coils Coil 215 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2484 Mtr-Chr5 32577007 32579394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2484 245 541 EXO70 exocyst subunit family AT5G58430 60.797 5.47e-122 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2484 - - cam:101500706 630.172