Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2483 ATGACGAATATTCTAATCCAAATATGGAGATGGTTGATGCAGCCAAAAGTGTGGAGATTTGTAGGCTTTGCTTCAGTTGTTGTTGGACTGGTTTGTTATGCTCTCAGCTCTTCCTTCAACTATCTCTTTGGAGAATGGAATTTCTTGAAGATTTTCCTTTACGGCGTTTTCAGCTTCATCATTAGCTTGGTCGTTTTATTTGTAAATATATGGCGACACTCAAGAAGTCTTCGATTCAAAGCACACACAGCATATTTGGTATTGACAATGACCTCGCTATATTCATTTTTCTTCGATAAATTGATGAATGGGAAACCTGATGGATATAGCCTCATTTCATGTGCTTCCTTTGCTATCATGTCACTTAGTTTGTCGCGGCAAACTCAGTGCGGATTTGAAGTTGATCTTCTTTACTTTTTTCTTGGATGTCTAATTGTACAACTCATGAAGATTAAACTGTTATTATTCATTCTTGGAGCTGGTTTCAGCTACTTGCTTATTATTCTTCGTTCTTCCGTTCATTCCATGGATGTAGGACGAGATAATGAGTCCGCTGGAATCCAAGATGCAAATTCCATAGTTATTGAAGTCCATTCACATTCACCACAGCTACCAAGTATTGATATTGGTAGTGGAATGGTGGAACAACTCAGTAATTATGTGAAGGTGCTTCAGCAAGAAAATTCATATCTCTTTGAAATGCTTTTGGAGAAGTTGGAAGAATATATTAGTTATGATTCTGGATTTAAAGTATCTGAGCCCGATTTCATGATCGAGGCCTTGCCAACTGAAACAATCGACAACCTTCACAAAACAGCCAAGTTGATGGTTAGCTCCGGGTTTGAAAGGGAATTTTCTGACGTGTATAGCAATATTCGAAGGGAATGTTTGGTAGAAAGCCTCTCAAGGTTTTGGTTCCAGAAACTTAGCATTGAAGCCCTTCAGATGTTGACATGGAAAGAGTTGGAAGACGAGATTAAAAGATGGATTAAAGTTTCCAAAGTGGCTTTGAGAATATTGTTCCGCTCTGAACGGCGACTTTGCGATCAAGTTTTCTTTGGATTGTCCACCACTGCTGATTTATCCTTCACAGATATTTGCAGGGAATCCATGCTCCAACTGCTGAATTTTGCCGAAGCTATCGCCATCGGAAGCCGATCACCCGAAAGGTTGTTTAGAGTTCTTGACATGTTTGAAACAATGCGCGACCTAATTCCAGAATTTGAGTCCCTGTTCCGTGATCAATACAATGGGTCGATGCAAAACGAAGCAACCACAATTTGGAAGAGATTGGGTGAAGCAATCATAGGCATTTTCATGGAGTTGGAGAATCTGATATGCCATGATCCGATGAATTTGGAAGCGGTTCCCGGTGGTGGAATTCACCCAATCACCCATTATGTGATGAACTATCTCAGTGCTACAAGTCGGTCACGGAAGACATTGGAGCAAGTGTTTGAAGAAGACTATGGACAATCATTGAAGGAATATCCCAAAATTGATGATAAAGTGCAATCCTCTTCCCCTCTCTCGATGCAGATGAGTTTCATTATGGAGCTATTAGATAGAAATTTGGAAGCCAACTCTAAAATCTACAAGGAGCCTTCTTTGAGTTATGTTTTCTTGATGAATAACTGCAGGTACATGGTTCAAAAAACCAAAGATAGTGAATTGGGAACCATTTTAGGTGATGTTGTGATCCAAAAATACGTAACAAAAGTTCGGCAGCATCATAAGAACTATGAAAAAAACTCATGGAGTAAAGTGTTGGATTGTTTGAAGTTGGACAACAATGATTCAATGCACCCTAATGAGGTAGCAAATTCAATGAAAAAGAAGTTAAAATCATTCAACATACTCTTTGGGGAAATATGCAGGGTTCAACCTTCTTGGTTTATCTGTGATAAACACCTTAAGAGAGAAATAATAATTTCCATTGTGAAACTCTTGTTGCCATCTTATGCAAAATTCATTCAGAGGTTTCAGAGAGTTCTTCAACTTGGTAAGAATGCTGATAAATATATTAAGTATGATATGGAAGATATCGCAACAGGACTCGACGATTTGTTTCAGGGGAGTGGTAAATCCAATTAG 2094 0.3873 MTNILIQIWRWLMQPKVWRFVGFASVVVGLVCYALSSSFNYLFGEWNFLKIFLYGVFSFIISLVVLFVNIWRHSRSLRFKAHTAYLVLTMTSLYSFFFDKLMNGKPDGYSLISCASFAIMSLSLSRQTQCGFEVDLLYFFLGCLIVQLMKIKLLLFILGAGFSYLLIILRSSVHSMDVGRDNESAGIQDANSIVIEVHSHSPQLPSIDIGSGMVEQLSNYVKVLQQENSYLFEMLLEKLEEYISYDSGFKVSEPDFMIEALPTETIDNLHKTAKLMVSSGFEREFSDVYSNIRRECLVESLSRFWFQKLSIEALQMLTWKELEDEIKRWIKVSKVALRILFRSERRLCDQVFFGLSTTADLSFTDICRESMLQLLNFAEAIAIGSRSPERLFRVLDMFETMRDLIPEFESLFRDQYNGSMQNEATTIWKRLGEAIIGIFMELENLICHDPMNLEAVPGGGIHPITHYVMNYLSATSRSRKTLEQVFEEDYGQSLKEYPKIDDKVQSSSPLSMQMSFIMELLDRNLEANSKIYKEPSLSYVFLMNNCRYMVQKTKDSELGTILGDVVIQKYVTKVRQHHKNYEKNSWSKVLDCLKLDNNDSMHPNEVANSMKKKLKSFNILFGEICRVQPSWFICDKHLKREIIISIVKLLLPSYAKFIQRFQRVLQLGKNADKYIKYDMEDIATGLDDLFQGSGKSN* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2483 697 PANTHER EXOCYST COMPLEX PROTEIN EXO70 24 691 IPR004140 GO:0000145|GO:0006887
Mtr5g2483 697 Pfam Exo70 exocyst complex subunit 327 687 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr5g2483 697 Gene3D Exocyst complex component Exo70 211 697 - -
Mtr5g2483 697 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 24 691 - -
Mtr5g2483 697 SUPERFAMILY Cullin repeat-like 219 690 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2483 Mtr-Chr5 32569885 32572351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2483 246 693 EXO70 exocyst subunit family AT5G58430 58.628 9.59e-177 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2483 - K07195 cam:101502613 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2483 5 32569885 32572351 Mtr5g2483 5 32569885 32572351 ECH