Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2482 ATGTCTGAAAACGGAGAAGAGAAATTACTCGCTGTGGCACGTCACATAGCAAAAACGCTAGGCCACAATAATAACAACATGGCTGATGATATTCTTCAAATCTTCTCTAATTTCGATGGAAGATTCTCGAAGGAGAATCTTTCTGAGAAAGTCGCTGCGGTCGAGGTTACTGACAGAGATCCAAGAGCTTTTGCGGCTTTGGATCACTGTCTTAAAAACCTCGACCGCCGAATCTCTCACTACGTTTCATCTGATCATCCAATTTGGGCAGACTCTGCTGACGCTGCTGCTTTTCTCGACGCCGTTGACGACTTAGTAGCTTCCGTTGCAGAGTGGAACCACCTCACCGGTGATAAATCCATCGCCACGTGTCTTGCACGCGCTGAAGATATGCTTCAACATGCTATGTTTCGTCTTGAAGATGAGTTTCGTTCTCTCATGGAACGCGGTGGTGAGTCGTTTGACCTAACACCGCCGTACCGGAATAGCGATTCGGTGAATTTACCGTTTGATTCTGAAGAAGAGGATGAGGAAATTGACGGTGGTGGTGAAGAGGATCTGATTCCGGTTGCCATGCCGGTAACAGATTACGAAATTGTGATTGATGCGTTACCGTCGGCGACAATTAACGATCTTCATGAGATCGCGAAACGAATGGTTGCCGGTGGATTTGGAAAAGAGTGTTCGCATGTGTATAGCAGTTGCCGGAGAGAATTCTTGGAGGAAAGTTTATCGAGATTAGGGTTACAGAAGCTGAGTATTGAAGATGTTCACAAAATGCAGTGGCAAGATATTGAAGATGAAATTGAAAGATGGATTAAAGGTTTCAATGTTGCTTTGAAGATACTTTTTCCGAGTGAGCGACGATTATGCGATCGCGTGTTTTTTGGATTCTCTTCAGCTGCAGATTTTTCTTTCATGGAGGTTTGTAGAGGTTCTACAGTTCAGTTGTTGAATTTCGCCGATGCGGTCGCAATTGGAAGCCGTTCGCCGGAGCGGTTGTTTAAAATTCTGGATGTGTTTGAAACATTGCGTGACCTAATTTCGGAGTTTGAGTTGTTGTTCTGTGATCAGTATAGTGTGTCTTTGAGGAATGAGGCAATTACTATATGGAAGAGATTGGGGGAAGCAATTAGGGGCATTTTTATGGAGTTGGAGAATTTGATTCGAAGGGATCCGGCTAAGGCAGGTGTTCCGGGTGGTGGTCTTCATCCGATTACGCGTTACGTGATGAATTACCTTCGCGCAGCGTGTAGGTCGAGGCAGACTTTGGAGCAAGTGTTTGAAGACTATGGACATCCATTGAAGGATTATCCTAAGATGGATGATAGGATGCATTCATCTTCGTCTTTGTCGGTGCAAATGGATTGGATTATGGAGTTATTAGAGAGCAATTTAGAAGCTAAATCCAAAATTTACAAGGACCCTGCTTTGTGCTATGTTTTCTTGATGAACAATTGCAGGTACATTGTTCAAAAAGCTGAAGATAGTGAATTAGGGACACTTTTGGGAGATGATTGGATCAAAAAACACACTGCGAAAATTCGGCAGTACCAAATGCAGTATCAAAGAAGCTCATGGAATAAGGTGTTTGGGTTTCTTAAGGTGGAGAATAATGGATCAATGCAACAGAATGGGGTAGCTAAGTCAATGAAAGAGAAGCTGAAATCGTTCAACATGATGTTTGATGATTTATGCAGGGTTCAATCTACATGGTTTATCTTCGATGAACAACTTAAAGAAGAAATACGAATTTCCATTGAGAAACTCTTGTTGCCAGCTTATGCAAATTTCATTGCTAGGTTTCAGAATGTTGCTGAAGTTGGCAAACATGCTGATAAATATGTTAAGTATGGAACAGAGGACATTGAAGCAAAACTCAATGATTTGTTTCAGGGAAGCAGTGGATCAACCGGTAGCCGAAAGCAAAGCTAA 1935 0.4264 MSENGEEKLLAVARHIAKTLGHNNNNMADDILQIFSNFDGRFSKENLSEKVAAVEVTDRDPRAFAALDHCLKNLDRRISHYVSSDHPIWADSADAAAFLDAVDDLVASVAEWNHLTGDKSIATCLARAEDMLQHAMFRLEDEFRSLMERGGESFDLTPPYRNSDSVNLPFDSEEEDEEIDGGGEEDLIPVAMPVTDYEIVIDALPSATINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESLSRLGLQKLSIEDVHKMQWQDIEDEIERWIKGFNVALKILFPSERRLCDRVFFGFSSAADFSFMEVCRGSTVQLLNFADAVAIGSRSPERLFKILDVFETLRDLISEFELLFCDQYSVSLRNEAITIWKRLGEAIRGIFMELENLIRRDPAKAGVPGGGLHPITRYVMNYLRAACRSRQTLEQVFEDYGHPLKDYPKMDDRMHSSSSLSVQMDWIMELLESNLEAKSKIYKDPALCYVFLMNNCRYIVQKAEDSELGTLLGDDWIKKHTAKIRQYQMQYQRSSWNKVFGFLKVENNGSMQQNGVAKSMKEKLKSFNMMFDDLCRVQSTWFIFDEQLKEEIRISIEKLLLPAYANFIARFQNVAEVGKHADKYVKYGTEDIEAKLNDLFQGSSGSTGSRKQS* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2482 644 SUPERFAMILY Cullin repeat-like 89 631 IPR016159 -
Mtr5g2482 644 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 632 IPR004140 GO:0000145|GO:0006887
Mtr5g2482 644 MobiDBLite consensus disorder prediction 166 185 - -
Mtr5g2482 644 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 632 - -
Mtr5g2482 644 Gene3D Exocyst complex component Exo70 87 641 - -
Mtr5g2482 644 Pfam Exo70 exocyst complex subunit 270 629 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr5g2482 644 MobiDBLite consensus disorder prediction 169 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2482 Mtr-Chr5 32566747 32569242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2482 1 635 EXO70 exocyst subunit family AT5G58430 69.279 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2482 K07195 - gmx:100803694 1018.07