Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2475 ATGGAGTTTCACAACCCATTTTTTAATAGCACTTTTATTTGCTCCTTTCTCTTTCTCTTTGTGCTACTCAAAATAGTTAAAAAATGGAGTTGTAACAATTCCAGTATCAATTTACCACCAGGACCATGGACACTACCCATCATAGGAAACATGCATCAACTTATTAGCAACTCATTGCCTCATCAATGCTTCAAAAATTTAGCTGATACATATGGACCCTTAATGCACCTAAAACTAGGAGAGGTATCATACCTAATAGTTAGTTCACCATCAATGGCCAAAGAGATTATGAAAACACATGACCTCAACTTTTGTGATAGACCAAACCTTCTTTTGTCCACAATATTTAGTTACAATGCTATTGATATTATCTTCTCTCCATATGGAGAACACTGGAGGCAACTACGAAAGATATGTGTTTTACAATTATTAAGTGCAAAGCGTGTCCAATCGTTTAGGTATATAAGAGAAGAAGAGGTGTCAAATCTTGTTAAATCAATATCTGCAAGTGAAGGATCAATTGTTAATCTCAGTCATAAGATTTTTTTAATGACATCAGGGATAACGACACGAGCAGCGTTTGGGAAAAGGAGTAAACACCAAGAAGCTTTCAAATCAGCAATAAAGGAGATAGCTAGTTTGCTGGGAGAATTTTGTATTGCTGATGTGTATCCTTCTGTTAAAATGTTTCAATGGGTGAGTAGGGCGAAGACGAAAGTTGAAAAGCTTCATAAAGAGATTGATATGATATTGCAAGATATCATCGTTGATCATAAAAACATTCACAAGGAAGAAAGCAAGGATGAAGATCTAGTTGATACTCTTCTCAAGATTCAACAGGAAAATGATCACTCACATAATCCATTAACTGATAACAATATGAAAGCAATCATTCTGGATATGTTTGGTGCTGGTACGGAAACATCGTCCGGGGCTGTGCTATGGGGGATATCTGAGATGGTAAAGAACCCAAAGATAATGGAGAAAGCACAAGCTGAAGTAAGAAAAGTGTTTGATAAAAAGGGGTATGTCGATGAAACAGAGTTGCACCAATTGATATACTTAAAGTCTATAATCAGAGAAACATTGAGGCTACATCCTTCTGTGCCTTTGTTGGTTCCAAGAGAAAGTAGAGAGAGATGCCAAATCAATGGGTATGAAATCCCAGCTAAAACAAGAGTTGCTATCAATGTTTGGGCAATTGGAAGAGATGAAAGGTATTGGGCAGAAGCTGAGAGTTTTAAACCTGAGAGGTTTCTCAATAGCACAATTGATTTCAAAGGCACAAATTTTGAATACATACCGTTCGGTGCTGGAAGAAGAATGTGTCCAGGCATGGCATTTGGCTTATCCAACATTGAGCTGCCTCTTGCTCAGTTACTTTACCACTTTGATTGGAAGCTTCCTAATGGAATGAAGAATGAAGAACTAGATATGACTGAGTCATTTGGGATGGCTATAGGAAGAAAACATGACCTATGCTTGATTCCTATTACTCGTCGTCCTTAA 1509 0.3724 MEFHNPFFNSTFICSFLFLFVLLKIVKKWSCNNSSINLPPGPWTLPIIGNMHQLISNSLPHQCFKNLADTYGPLMHLKLGEVSYLIVSSPSMAKEIMKTHDLNFCDRPNLLLSTIFSYNAIDIIFSPYGEHWRQLRKICVLQLLSAKRVQSFRYIREEEVSNLVKSISASEGSIVNLSHKIFLMTSGITTRAAFGKRSKHQEAFKSAIKEIASLLGEFCIADVYPSVKMFQWVSRAKTKVEKLHKEIDMILQDIIVDHKNIHKEESKDEDLVDTLLKIQQENDHSHNPLTDNNMKAIILDMFGAGTETSSGAVLWGISEMVKNPKIMEKAQAEVRKVFDKKGYVDETELHQLIYLKSIIRETLRLHPSVPLLVPRESRERCQINGYEIPAKTRVAINVWAIGRDERYWAEAESFKPERFLNSTIDFKGTNFEYIPFGAGRRMCPGMAFGLSNIELPLAQLLYHFDWKLPNGMKNEELDMTESFGMAIGRKHDLCLIPITRRP* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2475 502 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 PANTHER CYTOCHROME P450 71D10 11 500 - -
Mtr5g2475 502 Gene3D Cytochrome P450 31 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 Pfam Cytochrome P450 39 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 SUPERFAMILY Cytochrome P450 37 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 Coils Coil 233 253 - -
Mtr5g2475 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Mtr5g2475 502 PANTHER CYTOCHROME P450 71B11-RELATED 11 500 - -
Mtr5g2475 502 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2475 502 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2475 Mtr-Chr5 32479844 32481963 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2475 39 497 Cytochrome P450 AT3G26330 43.683 8.74e-137 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2475 - K23806 gmx:102670080 638.262