Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2470 ATGGCCACAGAAGCTAGAACAAAGTTTCAAAACCCAGATTACCGACCCGATTTCACAAACTTAACGCCGCCGGCGGCACCGTCAACTCACGACGGTCTTCACTACTGGCAATTCATGATTTCTGGATCCATCGCTGGCTGTATCGAACACATGGCAATGTTTCCTGTTGACACCGTTAAAACTCATATGCAAGCCATCACATCTTGTCCAATTAAATCCGTTTCCGTCCGTCAAGCACTTCAGTCAATCTTAAAATCAGAAGGCCCGTCCGCTTTATACCGCGGTATCGGTGCAATGGGCCTTGGCGCCGGTCCGGCCCACGCTGTTTATTTCTCGGTTTATGAAACACTTAAAAAGAAATTCTCACATGGAAATGTTAACGATCATTTTGTTCATGCTGGTTCGGGGGTTTGCGCGACGGTGGCGAGTGACGCGGTTTTTACGCCGATGGATATGGTTAAACAGAGATTGCAGTTGAGTAATAGTGGTTATAAAGGTGTGTTTGATTGTGTGAAGAGGGTTTTGAGTGAGGAAGGGTTTGGTGCTTTTTATGCTAGTTATAGGACTACTGTTTTGATGAATGCGCCTTTTACCGCTGTGCATTTCGCGACTTATGAGGCTGCAAAAAGAGGGTTGAATGAGATTTCGCCGGAGAGTGTTGATGATGAGAGGTTGATTGTTCATGCTACTGCCGGGGCCGCTGCTGGTGGGTTGGCTGCTGCTGTTACTACGCCGCTTGATGTTGTTAAAACTCAATTGCAATGCCAGGGTGTGTGTGGATGTGATAGGTTCAAAAGTGGTTCCATTGGCGATGTTATTAAAACAATAGTGAAAAAGGATGGATACAAAGGGCTCATGCGAGGGTGGGTTCCAAGGATGCTCTTTCATGCTCCTGCAGCCGCTATCTGCTGGTCTACATATGAAGCTGGAAAATCTTTTTTCCAAGATTACAATGAGCAGAGAGATTCTGGAACTGTCACCTAA 984 0.4624 MATEARTKFQNPDYRPDFTNLTPPAAPSTHDGLHYWQFMISGSIAGCIEHMAMFPVDTVKTHMQAITSCPIKSVSVRQALQSILKSEGPSALYRGIGAMGLGAGPAHAVYFSVYETLKKKFSHGNVNDHFVHAGSGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVFDCVKRVLSEEGFGAFYASYRTTVLMNAPFTAVHFATYEAAKRGLNEISPESVDDERLIVHATAGAAAGGLAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIKTIVKKDGYKGLMRGWVPRMLFHAPAAAICWSTYEAGKSFFQDYNEQRDSGTVT* 328
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2470 327 PANTHER MITOFERRIN-1-RELATED 1 322 - -
Mtr5g2470 327 SUPERFAMILY Mitochondrial carrier 31 308 IPR023395 -
Mtr5g2470 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 120 IPR018108 -
Mtr5g2470 327 Pfam Mitochondrial carrier protein 33 123 IPR018108 -
Mtr5g2470 327 Pfam Mitochondrial carrier protein 224 317 IPR018108 -
Mtr5g2470 327 Pfam Mitochondrial carrier protein 130 214 IPR018108 -
Mtr5g2470 327 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Mtr5g2470 327 PRINTS Mitochondrial carrier protein signature 51 65 IPR002067 GO:0055085
Mtr5g2470 327 PRINTS Mitochondrial carrier protein signature 142 160 IPR002067 GO:0055085
Mtr5g2470 327 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085
Mtr5g2470 327 PRINTS Mitochondrial carrier protein signature 232 254 IPR002067 GO:0055085
Mtr5g2470 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 211 IPR018108 -
Mtr5g2470 327 Gene3D Mitochondrial carrier domain 130 327 IPR023395 -
Mtr5g2470 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 223 313 IPR018108 -
Mtr5g2470 327 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 1 322 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr5g2470 Mtr-Chr5 32375499 32381420 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2470 129 323 Chloroplast and Mitochondria Gene Families AT1G07030 28.788 1.30e-13 68.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2470 K15113 - gmx:100802640 564.303