Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2465 ATGGACAAAAACTCAAGCTTGAATTTGCAGGAAAACTCTTTGCTTGGAGCCAATCAGTTATTGGAAAATGATTCCATGCCGAACTATGACGATGAATTGAAGCCGAAGGTTGGACAAATATTTGATACGTTAGCAGAAGGTAAACTGTTTTACCAAAATTATGCACATAACGTCGGGTTTAGTGTGCGTTCATCATCGGAAACTACAGATAAAAATGGTGTGAAACGTTGGAAATACTTTGTTTGCTCAAAAGAAGGTTATTTATCGGATAAGAAAAAAGATGAAGTGCTTGATGCAGTTGCTGTCAAATCTAGAAGAAGGAGTCTTACAAGAGAAGGATGCAATGCAAATGCCGTTTTCAAATGGGTTGAAGGAGGTAAGTATGAGCTTGCTCGATTTAATGAAAGTCATACACATGCACTTGCTTCACCCTCGAAGAGGCCATTTCTAAGATCAGCAAGAAAGGTGAATCCAATGCACAAGAGCTTATTACATGCATATGGTAGAGCAAATATTGGGCCTTCAAAATCATTCCACTTAATGAAAGAACAATTTGGGGGTTATGAAAATGTTGGATGCACGCAAAAGGATCTTCAAAATTATAAAAGAGATTTACAGACTTTGCTCAAAGATTCTGATGCAAATGTTTTTATTGATAACTTTAGAAGGAAGCAAGAACTTAATCCATCATTTTTTTATGCATACGAGGTAGATGAAGAAGACCGACTAAGATTGTGCATGTGGCATATAATGAAAAAAGTTTCCGAAAAAATAGGTGCTTCCTTGAATGATGATGAAGAGTTCAACCAATCTTTCAAATCATGTGTTTGGGGATCAGAGACACCAGATGAGTTTGAAGAAACATGGGACAGTATCATTTTCGACTTTGAGTTAGAAGAGAATGAGTGGCTGTCATATATGTTTGAAATTCGAAGCATGTGGATTCCAGCATACTTTAAAGACGTTTTGTTGGCTGGGATAATGAGAACAACATCAAGATCAGAAAGTGAGAATTCGTTTTATGGAAATTTCTTGAATCCTAATGTCAACTTGGTTGAATTTTGGATGAGGTTTGATTCAGCAATCGAAGCACAACGACATAAGGAGTTACTTGCCGATAACAGTTCAATTCATTCCATACCAAAACTAATGTTGGATCGTGACATAGAGAAGCATGCAAGAGATGTGTATGCTCGCGAGAAATTTTATATATTTCAGAAGGAATTATGGATGGCTTGTGTTGATTGTGGAATTGAAAATAAGAAAGAGGAAGATGGAATGGAAATATTTCTGGTACATGATAATAGTAAGGTCAATCGTAATCTTCGAGAAGTAGTGTACAATTTGTCTTATCACAATGCAAACTGCTCCTGCAAAATGTTCCAGGCTGAAGGAATACCTTGTAGACACATACTTTGTGTTGTAAAGGGAAAAAAATTGAATGAAATACCAAGTAAGTACATATTGAATAGGTGGACTAAGTTTGCAAATAAAAAACCTGTGTTTGACATAGGTGATATTGTCTATGAAAAGGCTGGGCAAGGTGGAATCGTTTCAAATGTCTGGGATAAGTTATTTAGGTGTGTGGAGAAGGCTGGGCAAGATAAAGAAAAGCTGCTTATTGTGTTAAATGGGGCTGTTATAATGGAAAAAGAGTTGGATGAGTTTGAAGGGAGTTCTAAGCAAACCAAGACAAATGATTTGGAAACTTACATCAGAACAAATATTCCTGAGAGAGTAGAAATTCTTCCACCACAGTTTGCAAAGACTAAAGGCAGTGGTAAAAGAATCAAAAGTGGCAAAGAGAAGGCTGTCGAACAACAACAAAAAAGAACGAGACTTTGCAAGGCATGTGGTGAATATGCGCATCATAACAGCCGCAATTGTCCTAACAAATAA 1899 0.3676 MDKNSSLNLQENSLLGANQLLENDSMPNYDDELKPKVGQIFDTLAEGKLFYQNYAHNVGFSVRSSSETTDKNGVKRWKYFVCSKEGYLSDKKKDEVLDAVAVKSRRRSLTREGCNANAVFKWVEGGKYELARFNESHTHALASPSKRPFLRSARKVNPMHKSLLHAYGRANIGPSKSFHLMKEQFGGYENVGCTQKDLQNYKRDLQTLLKDSDANVFIDNFRRKQELNPSFFYAYEVDEEDRLRLCMWHIMKKVSEKIGASLNDDEEFNQSFKSCVWGSETPDEFEETWDSIIFDFELEENEWLSYMFEIRSMWIPAYFKDVLLAGIMRTTSRSESENSFYGNFLNPNVNLVEFWMRFDSAIEAQRHKELLADNSSIHSIPKLMLDRDIEKHARDVYAREKFYIFQKELWMACVDCGIENKKEEDGMEIFLVHDNSKVNRNLREVVYNLSYHNANCSCKMFQAEGIPCRHILCVVKGKKLNEIPSKYILNRWTKFANKKPVFDIGDIVYEKAGQGGIVSNVWDKLFRCVEKAGQDKEKLLIVLNGAVIMEKELDEFEGSSKQTKTNDLETYIRTNIPERVEILPPQFAKTKGSGKRIKSGKEKAVEQQQKRTRLCKACGEYAHHNSRNCPNK* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2465 632 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 25 159 - -
Mtr5g2465 632 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 243 506 - -
Mtr5g2465 632 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 25 159 IPR031052 GO:0006355
Mtr5g2465 632 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 243 506 IPR031052 GO:0006355
Mtr5g2465 632 SMART 26again6 454 481 IPR006564 GO:0008270
Mtr5g2465 632 Pfam SWIM zinc finger 454 472 IPR007527 GO:0008270
Mtr5g2465 632 Pfam FAR1 DNA-binding domain 50 142 IPR004330 -
Mtr5g2465 632 ProSiteProfiles Zinc finger SWIM-type profile. 447 479 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2465 Mtr-Chr5 32311749 32314053 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr5g2465 FAR1 8e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2465 - - soe:110791027 538.11