Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2455 ATGTCCAAAGTAGTCTGCGTCACCGGCGGCAGCGGATGCATCGGTTCATGGCTCGTTCATCTCCTTCTCCACCGTGGCTACATCGTTCACGCCACCGTCCAAAATCTCAACGATGAGAACGAGACGAAGCATCTACAAGCTCTTGAAGGAGCTCAAACTAATCTCCGTCTCTTCCAAATTGACCTCCTCAACTACGACACTGTCCTCGCCGCTGTTCACGGTTGCGATGGAGTTTTCCACCTCGCTTCGCCTTGCATTGTAGATAAAGTTCTTGACCCTCAGAAGGAGCTTTTGGATCCTGCAATTAAAGGGACTTTGAATGTGCTTACTGCGGCGAAGGAAGTAGGGGTGAAGCGAGTGGTTGTTACTTCTTCTATCTCTGCTATTATACCTAGTCCTAATTGGCCTTCTGATGTTGTAAAGAGAGAGGATTGTTGGACTGATGTTGAGTATTGCAAGCAAAAAGAGTTGTGGTATCCAATGTCCAAGACATTGGCTGAGAAAGCTGCTTGGGATTTTTCCAAAGAAAATGGTTTGGATGTTGTTGTGGTGAATCCTGGTACTGTGATGGGCCCTGTTATTCCGCCAAGGATTAATGCAAGCATGCTCATGCTTGTGCGACTTCTTCAAGGCTGCACTGAAACATATGAAGACTTTTTTATGGGATTAGTCCACTTCAAAGATGTAGCATTGGCACATATTTTGGTGTATGAGAACAAGGAAGCAACTGGCAGACATGTGTGTGTTGAGGCTATCACTCACTACGGTGACTTTGCGGCAAAGGTTGCTGAACTTTATCCAGAATATAACGTGCCTAAGATACAACGAGATACACAACCTGGACTGTTGAGAGCAAAGGATGGATCAAAGAAGCTCATGGATTTGGGTTTGGAATTCATTCCGATGGAGCAGATTATAAGGGATGCTGTAGAAAGCTTGAAGAGCAAAGGACTCATTTCATGA 963 0.4538 MSKVVCVTGGSGCIGSWLVHLLLHRGYIVHATVQNLNDENETKHLQALEGAQTNLRLFQIDLLNYDTVLAAVHGCDGVFHLASPCIVDKVLDPQKELLDPAIKGTLNVLTAAKEVGVKRVVVTSSISAIIPSPNWPSDVVKREDCWTDVEYCKQKELWYPMSKTLAEKAAWDFSKENGLDVVVVNPGTVMGPVIPPRINASMLMLVRLLQGCTETYEDFFMGLVHFKDVALAHILVYENKEATGRHVCVEAITHYGDFAAKVAELYPEYNVPKIQRDTQPGLLRAKDGSKKLMDLGLEFIPMEQIIRDAVESLKSKGLIS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2455 320 Pfam NAD dependent epimerase/dehydratase family 5 246 IPR001509 -
Mtr5g2455 320 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Mtr5g2455 320 CDD FR_SDR_e 5 297 - -
Mtr5g2455 320 Gene3D - 1 320 - -
Mtr5g2455 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
Mtr5g2455 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2455 Mtr-Chr5 32215404 32218934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2455 3 320 Monolignol Biosynthesis Gene Families AT5G58490 76.730 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2455 - - gmx:100803241 569.311