Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2447 ATGGCTGCAGCCTTAGAGTGTTGGCCAACTCGCACCACAACCACCATGACTGATGAAGACACGGTTGAACAACAACAAGTCCTCATGAAAACTCACCACAGATCAGAAGCTACTTCTTCTTCTTCTTCTCTTTCTCTTGCTTCCAAAGACTCTTCCATTCTCATACACAAGAACAAGTTTCACAAACTTGGTCGTAATCTTTCTGATGCAATCACATCTTTCAAAAACACACTCAACCTTAATAATACTAACAATCCTGAGTCTCCTCCTTCTTCTAAGAAACTTGCTTGGGCTTCTGTTCTTCGTAATCTTACTCAACTCTACCCTGGAACTCAGCTTCCTGATAATCTTATCTCCACCATTCGTAATCATTACAATTCTCTTCCTCTCAGTTATGCACAGGCTGAATTTGATATGAAGGATGTGTTTCTTCACATCAAGTTGATGGAACAGGCATTGGAAAGTGATCAGCCTGCGATTTTGATTCAACAAGAGTGTGGTGGTCGTGATGGTGAGGTTCAGGCTCAGGGGTCTGTTTTGAAGCTCAATTTTGCTTGCAACGCGCTCATTTCATGGCCTGCAATGTCGGTTGCGTTGGATAGTTTCTCCATTTGTAGCAAGAGGGCACAGATCTTTGAGAAGAAAGGTTTCACCTTAGGGGTTGTTCTTCTTGTTGTTAGGACCGGGCATGAAAAATTGGTCAAGACCCGAGTTGAGAATGCTTTGAAGTTTGCGATAAAGAAGCCCAAAACGGGTTCTGTGAATGTGAAGCTTTCATTTGGACTTTGTGGGTGTCAGGAAGAGAGTTTCAAGGGGAGAGAATTAGGGGAGATTGGAGAAGATAGTGGTAGTGGAAAGGAGTTTGAGAATTCTAGCCAAAAGATTCAGCTTCAGATGCCTTTGCCTACCTCATCTTTCACTGTATCGGTCGATGAATGGCAGACGATAAAGTCGGGTGGTGATGAGATTGAGAAATGGTTGTTGAATGCTGATTATGTTGAGTTTACAGAACAGATTGGACCTACTTCTTATAAAGGGATCTACATGGGGAAAAGGGTTGGAATCGAGAAGCTGAAAGGGTGTGAAAAAGGAAATGCTTACGAGTTCGAGCTCCACAAAGATCTTCTGGAACTAATGACATGTGGCCATAGAAACATTCTGCAGTTCTGTGGCATATGTGTGGATGATAACCATGGATTATGCGTGGTGACTAAGTTCATGGTAGGTAAGTCTGTGCATGACTTAATGTTAAAGAACAAGAAGCTTCAGAGTAAGGATATTGTTAGAATCGCGGTTGATGTAGCCGAGGGGATCAAGTTTATGAATGATCATGGTGTTGCATACAGAGATCTTAATACGCAGAGGATTCTGTTAGATAGGCATGGGAATGCTTGTTTGGGAAATATGGGTGTAGTCACTGCCTGCAAGAGTGTCGGAGAAGCAATGGAGTATGAAACTGATGGTTATAGATGGCTAGCTCCTGAGATAATTGCAGGAGACCCTGAAAGCGTGACAGAGACATCGATGAGCAACGTTTATAGTTATGGCATGGTAATTTGGGAGATGGTTAGTGGTGAGGCAGCATATTCTGCACTTTCTCCTGTGCAGGCAGCAGTTGGCATTGCAGCCTGTGGCCTTAGACCTGAAGTTCCCAAGGACTGCCAACCAAATCTAAAATACATTATGACAAAATGCTGGAACAATACCCCTTCCAAACGTCCTCAATTCTCCGATATTTTAGCCATATTGCTGCAACCATACAACAAAAGTAGGTAA 1776 0.4291 MAAALECWPTRTTTTMTDEDTVEQQQVLMKTHHRSEATSSSSSLSLASKDSSILIHKNKFHKLGRNLSDAITSFKNTLNLNNTNNPESPPSSKKLAWASVLRNLTQLYPGTQLPDNLISTIRNHYNSLPLSYAQAEFDMKDVFLHIKLMEQALESDQPAILIQQECGGRDGEVQAQGSVLKLNFACNALISWPAMSVALDSFSICSKRAQIFEKKGFTLGVVLLVVRTGHEKLVKTRVENALKFAIKKPKTGSVNVKLSFGLCGCQEESFKGRELGEIGEDSGSGKEFENSSQKIQLQMPLPTSSFTVSVDEWQTIKSGGDEIEKWLLNADYVEFTEQIGPTSYKGIYMGKRVGIEKLKGCEKGNAYEFELHKDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMVGKSVHDLMLKNKKLQSKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGNMGVVTACKSVGEAMEYETDGYRWLAPEIIAGDPESVTETSMSNVYSYGMVIWEMVSGEAAYSALSPVQAAVGIAACGLRPEVPKDCQPNLKYIMTKCWNNTPSKRPQFSDILAILLQPYNKSR* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2447 591 SUPERFAMILY Protein kinase-like (PK-like) 316 583 IPR011009 -
Mtr5g2447 591 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 587 - -
Mtr5g2447 591 PANTHER SERINE-THREONINE PROTEIN KINASE 1 587 - -
Mtr5g2447 591 Gene3D Transferase(Phosphotransferase) domain 1 327 588 - -
Mtr5g2447 591 ProSiteProfiles Protein kinase domain profile. 333 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2447 591 Pfam Protein tyrosine and serine/threonine kinase 369 582 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2447 Mtr-Chr5 32137127 32142037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2447 316 585 MAP Kinase Kinase Kinase AT2G17700 32.852 1.42e-51 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Mtr5g2447 PK_Tyr_Ser-Thr 2.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2447 - - pvu:PHAVU_008G258400g 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2447 5 32137127 32142037 Mtr5g2447 5 32137127 32142037 ECH
Mtr3g1744 3 29855770 29859621 Mtr5g2447 5 32137127 32142037 PCT