Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2441 ATGGCTGACGCTTTGCTTGGAGTTGTGTTTGAAAATTTGACGTCTCTCCTTCAAAATGAATTTTCAACCATTTCTGGAATTAAGTCAAAGGCTCAAAAGCTATCAGACAACTTAGTTCGCATCAAGGCTGTTCTTGAAGATGCTGAGAAGAAACAATTCAAAGAACTCTCTATTAAGCTATGGTTACAAGACCTCAAAGATGCTGTTTATGTGCTCGATGATATCCTTGATGAGTACTCGATTAAGTCTTGTCGACTGAGAGGATGTACCTCTTTCAAACCAAAGAACATCATGTTTCGCCATGAGATTGGTAACAGGTTAAAAGAGATTACAAGGAGGTTAGATGATATTGCTGAAAGTAAGAACAAGTTTTCTCTACAGATGGGTGGAACTCTTAGGGAAATCCCAGATCAAGTAGCTGAAGGGCGCCAAACCGGCTCCATTATTGCTGAACCAAAAGTGTTTGGACGAGAAGTTGATAAAGAAAAGATTGCTGAGTTTCTTCTCACCCAAGCAAGGGACTCTGACTTCCTTTCCGTCTATCCCATAGTTGGTTTAGGTGGTGTTGGAAAAACAACTCTTGTTCAATTGGTCTACAATGATGTTAGGGTGAGTGACAATTTTGAAAAAAAAATTTGGGTTTGTGTTTCTGAGACTTTCTCGGTAAAGAGGATTTTGTGTTCTATTATAGAATCTATCACATTAGAGAAGTGTCCTGACTTTGAGTATGCTGTAATGGAAAGAAAGGTGCAAGGATTGTTGCAAGGGAAAAGATATTTGTTGGTTTTGGATGATGTATGGAATCAAAATGAACAATTGGAATCAGGGTTAACACGAGAGAAATGGAACAAATTGAAACCTGTGTTGTCTTGTGGATCCAAAGGTAGTTCCATTTTATTGTCCACCCGTGATGAAGTTGTTGCAACAATCACAGGAACATGCCAAACTCATCATCGTTTGTCTTCTCTCTCTGATAGTGAATGTTGGCTGTTGTTCGAACAATATGCATTTGGACATTACAAAGAAGAGCGTGCTGATCTCGTGGCAATAGGAAAGGAGATAGTAAAGAAATGTAATGGATTGCCTCTTGCAGCAAAAGCATTGGGAAGTTTAATGAACTCAAGGAAAGATGAAAAGGAATGGCTTAAAATTAAAGATAGTGAACTTTGGGATTTATCAGATGAAAATTCCATTTTGCCTGCTTTGAGGTTGAGTTACTTTTATTTACCGGCAGCCCTAAAACAATGTTTCTCTTTTTGTGCTATATTTCCCAAAGATGCAGAAATCCTAAAGGAAAAATTGATTTGGCTTTGGATGGCTAATGGATTGATTTCATCTAGGGGTAATATGGAGGTTGAAGATGTTGGCATCATGGTTTGGGATGAATTGTATCAAAAATCATTCTTTCAAGATAGAAAAATGGATGAATTTTCTGGCGACATTTCATTCAAGATTCATGATCTTGTCCATGATCTTGCTCAATCAGTAATGGGGCAAGAATGTATGTATTTGGAGAATGCAAACTTGACTAGTTTGTCGAAAAGCACACACCATATTAGTTTTGACAATAACGACTCGTTATCCTTCGACAAGGATGCTTTCAAAATAGTTGAATCCTTGCGAACATGGTTTGAGTTGTGTAGTATTTTGTCAAAAGAAAAACATGATTACTTCCCAACAAACCTTTCTCTTCGGGTTTTACGCACATCCTTTATCCAGATGCCATCACTAGGGAGTTTAATTCATTTAAGGTATTTGGAACTTCGTTCTCTTGATATAAAAAAGTTGCCTAACTCAATTTACAACTTACAAAAACTGGAAATCTTGAAAATAAAACGCTGTCGTAAACTGAGTTGTCTCCCAAAACGCTTGGCTTGCTTACAAAATCTTAGACATATAGTCATTGACAGATGTAAATCTTTGTCTCTCATGTTTCCTAACATTGGAAAATTAACTTGTCTAAGAACATTAAGTGTGTACATTGTTAGTTTAGAGAAAGGGAATAGCTTGACAGAGTTACGTGATCTAAACCTCGGTGGAAAACTGAGTATCAAAGGATTAAACAATGTTGGCAGTTTATCTGAAGCTGAAGCGGCTAATTTGATGGGTAAAAAAGACCTTCATGAATTATGCTTGTCATGGGTATACAAGGAGGAATCTACGGTTAGTGCTGAGCAAGTACTTGAAGTGCTTCAACCTCACTCAAATCTCAAATGCTTGACAATAAATTACTATGAAGGATTATCGTTACCAAGTTGGATAATTATTCTTAGTAATTTAATTTCTCTTGAACTTGAGATTTGCAACAAAATTGTGCGGCTTCCGTTACTTGGTAAACTACCATCTCTAAAAAAACTAAGATTATATGGTATGAATAATCTGAAATACTTGGATGATGATGAATCTGAGTATGGTATGGAGGTGAGCGTTTTCCCATCTCTAGAGGAACTCAACTTAAAATCCCTACCAAACATAGAGGGATTATTGAAAGTGGAAAGAGGGGAGATGTTTCCTTGTCTTTCTAAGTTGGATATCTGGGATTGCCCTGAACTTGGACTGCCATGTCTTCCATCTCTTAAATCCCTCCATTTATGGGAATGTAACAATGAGTTACTGAGGTCAATCTCTACCTTCCGTGGTCTTACTCAGCTTACCCTAAATAGTGGTGAAGGAATAACATCCTTACCAGAGGAGATGTTCAAAAACCTTACTTCTCTTCAATCTCTGTGTATCAATTGTTGTAATGAGTTGGAGTCCTTACCAGAGCAAAACTGGGAAGGTCTTCAATCCCTTCGAGCTCTACAGATTTGGGGTTGTAGAGGATTGCGATGCTTGCCGGAGGGTATTCGACACCTCACTTCTCTTGAGCTTCTTGATATCATTGATTGCCCAACATTAGAGGAACGATGCAAAGAGGGAACATGGGAGGATTGGGACAAGATAGCTCATATTCCAAAAATACTGTTTACAGAGGATTAA 2979 0.378 MADALLGVVFENLTSLLQNEFSTISGIKSKAQKLSDNLVRIKAVLEDAEKKQFKELSIKLWLQDLKDAVYVLDDILDEYSIKSCRLRGCTSFKPKNIMFRHEIGNRLKEITRRLDDIAESKNKFSLQMGGTLREIPDQVAEGRQTGSIIAEPKVFGREVDKEKIAEFLLTQARDSDFLSVYPIVGLGGVGKTTLVQLVYNDVRVSDNFEKKIWVCVSETFSVKRILCSIIESITLEKCPDFEYAVMERKVQGLLQGKRYLLVLDDVWNQNEQLESGLTREKWNKLKPVLSCGSKGSSILLSTRDEVVATITGTCQTHHRLSSLSDSECWLLFEQYAFGHYKEERADLVAIGKEIVKKCNGLPLAAKALGSLMNSRKDEKEWLKIKDSELWDLSDENSILPALRLSYFYLPAALKQCFSFCAIFPKDAEILKEKLIWLWMANGLISSRGNMEVEDVGIMVWDELYQKSFFQDRKMDEFSGDISFKIHDLVHDLAQSVMGQECMYLENANLTSLSKSTHHISFDNNDSLSFDKDAFKIVESLRTWFELCSILSKEKHDYFPTNLSLRVLRTSFIQMPSLGSLIHLRYLELRSLDIKKLPNSIYNLQKLEILKIKRCRKLSCLPKRLACLQNLRHIVIDRCKSLSLMFPNIGKLTCLRTLSVYIVSLEKGNSLTELRDLNLGGKLSIKGLNNVGSLSEAEAANLMGKKDLHELCLSWVYKEESTVSAEQVLEVLQPHSNLKCLTINYYEGLSLPSWIIILSNLISLELEICNKIVRLPLLGKLPSLKKLRLYGMNNLKYLDDDESEYGMEVSVFPSLEELNLKSLPNIEGLLKVERGEMFPCLSKLDIWDCPELGLPCLPSLKSLHLWECNNELLRSISTFRGLTQLTLNSGEGITSLPEEMFKNLTSLQSLCINCCNELESLPEQNWEGLQSLRALQIWGCRGLRCLPEGIRHLTSLELLDIIDCPTLEERCKEGTWEDWDKIAHIPKILFTED* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2441 992 Gene3D Ribonuclease Inhibitor 499 665 IPR032675 -
Mtr5g2441 992 Gene3D Ribonuclease Inhibitor 853 973 IPR032675 -
Mtr5g2441 992 Gene3D Ribonuclease Inhibitor 666 852 IPR032675 -
Mtr5g2441 992 SUPERFAMILY L domain-like 471 982 - -
Mtr5g2441 992 Gene3D - 405 496 IPR036388 -
Mtr5g2441 992 CDD RX-CC_like 2 119 IPR038005 -
Mtr5g2441 992 Pfam NB-ARC domain 158 386 IPR002182 GO:0043531
Mtr5g2441 992 Gene3D - 6 118 - -
Mtr5g2441 992 PRINTS Disease resistance protein signature 180 195 - -
Mtr5g2441 992 PRINTS Disease resistance protein signature 253 267 - -
Mtr5g2441 992 PRINTS Disease resistance protein signature 358 372 - -
Mtr5g2441 992 PRINTS Disease resistance protein signature 950 966 - -
Mtr5g2441 992 Gene3D - 137 316 IPR027417 -
Mtr5g2441 992 Coils Coil 31 51 - -
Mtr5g2441 992 PANTHER DISEASE RESISTANCE PROTEIN RP 28 922 IPR044974 GO:0006952
Mtr5g2441 992 Pfam Rx N-terminal domain 6 100 IPR041118 -
Mtr5g2441 992 Pfam Leucine rich repeat 879 938 IPR001611 GO:0005515
Mtr5g2441 992 PANTHER OS05G0414200 PROTEIN 28 922 - -
Mtr5g2441 992 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 420 IPR027417 -
Mtr5g2441 992 Gene3D - 322 404 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2441 Mtr-Chr5 32037673 32044075 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2441 183 797 WRKY Transcription Factor Family AT5G45050 23.982 1.56e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2441 - - mtr:MTR_5g071670 1486.86