Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2429 ATGGCTGAAGCTTTACTTGGTGTTGTGTTTGAAAATCTACTATCTCTTGTTCAAAATGAATTTGCAACCATTTCTGGAATCAAGTCCAAGGCTCTAAAGCTATCAACCACCTTAGATTTGATCAAGGCCGTTCTTGAAGATGCTGAGAAGAAACAAATAACAGACCGCTCTATAAAGGTATGGCTTCAACAACTCAAAGATGCAATCTACATACTAGATGATATTCTTGATGAGTGTTCCATTCAATCCACTCGACAAAAGGGCATATCTTCTTTTACATTAAAGAATATCATGTTTCGCCATAAAATTGGCACTAGGTTTAAAGAAATTACAAACAGATTCGATGATATTGCTGAAAGTAAAAACAAGTTTCTTCTACAAGAATGTGTTGCTGTTAGGGAAAGGTCAATCAATGTGGCTGAATGGCGTCAAACTAGCTCTATTATTGCTGAACCAAAAGTATATGGTCGAGAAGATGATAAAGAGAAGATTGTCGAGTTTCTTCTCACCCAAGCAAAGGGCTCTGACCTCCTTTCCATCTATCCAATTGTTGGCTTAGGTGGTATTGGGAAAACAACTCTTGCTCAATTAGTTTATAATGATCACCGGGTGAGTGACAATTTTGATACAAAAATTTGGGTTTGTGTTTCTGAGGCTTTCTCTGTTAACAAAATTTTGTGTACTATTATAGAATCTTTTTCAAGAGAAAAGTGTGATGCCTTAGATTTAGATGTTATACAACGACAAGTGCAAGAATTGTTGGAAGGTAAAAGATATTTGCTTGTTTTGGATGATGTGTGGAACAGAAATCAAGAACTGGAATTTGGATTAAGCCAAGAGAAATGGAATAAGTTGAAATCCGTGTTGTCAACTGGATCCAAAGGTTCATCCATTTTAGTCTCCACTCGTGATAAGGATGTTGCTGAGATCATGGGAACATGCCAAGCTCATCATTTGTCTGGTCTATCTGAATATGAATGTTGGTTGTTGTTCAAACAATATGCATTTCGACATGATAGAGAGCAGCAGACTGAGCTTGTCACAATAGGAAAAGAGATAGTAAAGAAGTGTGGGGGATTGCCTCTTGCAGCACAAGCATTGGGAGGCCTAATGTGCTCAAGGAGTGGAGAAAAAGAATGGCTTGAAATTAAAGATAGCAGGATTTGGTCTTTACCGAATGAGAATTCTATTTTGCCTGCTTTAAGGTTGAGCTACTTTCATTTAAACCCAACCTTAAAACAATGTTTCACTTTTTGTGCCATGTTTCCCAAAGATATAGAAATCATGAAGGGAGATTTAATTCATCTCTGGATCGCCAACGGATTTATATCATCAAGGGAAAATTTAGAGGTAGAAGATGTTGGAAATATGATTTGGAATGAATTGTGCCAAAAGTCATTTTTCCAAGAAATCAAGATGGTCGATGATTCAGGAGGCATTTCTTTCAAGTTGCATGATCTTGTCCATGATCTTGCTCAATCAATTATAGGATCGGAGTGTTTGATTTTGGACAATACAAACATAACTGACCTGTCAAGAAGCACACACCATATTGGTTTAGTATCTGCAACACCGTCATTATTTGACAAGGGTGCTTTCACAAAAGTTGAATCGTTGCGAACATTGTTTCAGATAGGTTTTTACACCACAAGATTTTATGATTACTTCCCAACCTCTATACGGGTTTTACGCACAAACTCTTCCAATTTATCATCGCTAAGTAATTTAATTCATTTGAGGTACTTGGAGCTGTTCGATTTCCATGACATAAAAACCCTACCTGACTCAATTTATAGCTTGCGTAATTTGGAAATCTTGAAACTGAAACATTTTTCTAAACTTCGTTGTCTACCGGAACACTTGACTTGCTTACAAAATCTCAGACATCTTGTTATTGAAAATTGTGATGCATTGTCCCGTGTGTTCCCTAACATTGGTAAATTATCTTCCCTAAGAACATTAAGTAAACACATTGTCCGTTTAGAGATTGGATACAGCTTGGCAGAATTACATGATCTAAAGCTAGGGGGAAAACTAAGCATTACTTGCCTAGAAAATGTTGGAAGTTTGTCTGAAGCTCGAGAAGCCAATCTGATAGATAAAAAAGAACTTCAGGAAATATGCTTCTCATGGAACAACAGGCGTAAAACCAAGACACCTGCTACTAGCACCGAGGAAATACTTGAAGTGCTTCAACCTCACTCAAATCTCAAGATCTTGAAAATACATGGCTATGACGGATTGCACCTCCCATGTTGGATCCAAATTCAAAGTAGTTTAGCTGTTCTTAGACTTTCTTATTGCAAAAACTGTGTGCGGCTTCCATCACTTGCTAAATTACCATCTCTCAAAAAACTCCAATTATGGTATATGGATAATGTGCAGTATGTGGATGATGAAGAATCAAGCGATGGTGTGGAGGTTAGGGGTTTCCCATCTCTGGAGGAGCTGCTTTTAGGTAATTTACCTAACTTGGAACGGTTGTTGAAAGTGGAAACAGGGGAGATTTTTCCCCGCCTTTCTAAGTTGGCCATCGTTGGTTGCCCTAAACTTGGGTTGCCACACCTTTCATCGTTTAAAGAACTCATTGTAGATGGATGTAACAATGAGTTGCTGGAGTCAATCTCTAGTTTCTACGGCCTAACTACCCTTGAGATTAATAGAGGTGAAGATGTGACATATTTTCCAAAAGGGATGTTGAAAAACCTGACCTGTCTTCGAACTTTGGAAATATCTGATTTCCCAAAAGTGAAAGCATTGCCAAGTGAAGCCTTCAACCTAGCTTTGGAGCATCTTGGTATCCATCACTGTTGTGAGCTTGACTCATTACCAGAACAACTTTTTGAAGGTCTACGATCCCTTCGAACCATGGAGATTGCTTTCTGTGAAAGATTGAGATGCTTGCCAGAAGGTATTCGCCACCTCACATCACTTGAGGTTCTGACAGTTTATGGTTGCCCAGCTGTAGCAGAGCGATGTAAGGAAGAAATAGGAGAGGACTGGGACATGATAGAACACATTCCAAAATTATCTATTAATTAG 3042 0.3833 MAEALLGVVFENLLSLVQNEFATISGIKSKALKLSTTLDLIKAVLEDAEKKQITDRSIKVWLQQLKDAIYILDDILDECSIQSTRQKGISSFTLKNIMFRHKIGTRFKEITNRFDDIAESKNKFLLQECVAVRERSINVAEWRQTSSIIAEPKVYGREDDKEKIVEFLLTQAKGSDLLSIYPIVGLGGIGKTTLAQLVYNDHRVSDNFDTKIWVCVSEAFSVNKILCTIIESFSREKCDALDLDVIQRQVQELLEGKRYLLVLDDVWNRNQELEFGLSQEKWNKLKSVLSTGSKGSSILVSTRDKDVAEIMGTCQAHHLSGLSEYECWLLFKQYAFRHDREQQTELVTIGKEIVKKCGGLPLAAQALGGLMCSRSGEKEWLEIKDSRIWSLPNENSILPALRLSYFHLNPTLKQCFTFCAMFPKDIEIMKGDLIHLWIANGFISSRENLEVEDVGNMIWNELCQKSFFQEIKMVDDSGGISFKLHDLVHDLAQSIIGSECLILDNTNITDLSRSTHHIGLVSATPSLFDKGAFTKVESLRTLFQIGFYTTRFYDYFPTSIRVLRTNSSNLSSLSNLIHLRYLELFDFHDIKTLPDSIYSLRNLEILKLKHFSKLRCLPEHLTCLQNLRHLVIENCDALSRVFPNIGKLSSLRTLSKHIVRLEIGYSLAELHDLKLGGKLSITCLENVGSLSEAREANLIDKKELQEICFSWNNRRKTKTPATSTEEILEVLQPHSNLKILKIHGYDGLHLPCWIQIQSSLAVLRLSYCKNCVRLPSLAKLPSLKKLQLWYMDNVQYVDDEESSDGVEVRGFPSLEELLLGNLPNLERLLKVETGEIFPRLSKLAIVGCPKLGLPHLSSFKELIVDGCNNELLESISSFYGLTTLEINRGEDVTYFPKGMLKNLTCLRTLEISDFPKVKALPSEAFNLALEHLGIHHCCELDSLPEQLFEGLRSLRTMEIAFCERLRCLPEGIRHLTSLEVLTVYGCPAVAERCKEEIGEDWDMIEHIPKLSIN* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2429 1013 Gene3D - 137 316 IPR027417 -
Mtr5g2429 1013 CDD RX-CC_like 2 119 IPR038005 -
Mtr5g2429 1013 Pfam NB-ARC domain 157 385 IPR002182 GO:0043531
Mtr5g2429 1013 Gene3D - 411 494 IPR036388 -
Mtr5g2429 1013 Gene3D - 321 409 IPR042197 -
Mtr5g2429 1013 SUPERFAMILY RNI-like 810 986 - -
Mtr5g2429 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 419 IPR027417 -
Mtr5g2429 1013 PANTHER OS05G0414200 PROTEIN 30 920 - -
Mtr5g2429 1013 Gene3D Ribonuclease Inhibitor 530 657 IPR032675 -
Mtr5g2429 1013 PANTHER DISEASE RESISTANCE PROTEIN RP 30 920 IPR044974 GO:0006952
Mtr5g2429 1013 Pfam Rx N-terminal domain 6 92 IPR041118 -
Mtr5g2429 1013 SUPERFAMILY L domain-like 483 851 - -
Mtr5g2429 1013 Gene3D - 6 118 - -
Mtr5g2429 1013 Gene3D Ribonuclease Inhibitor 856 999 IPR032675 -
Mtr5g2429 1013 Gene3D Ribonuclease Inhibitor 662 855 IPR032675 -
Mtr5g2429 1013 PRINTS Disease resistance protein signature 180 195 - -
Mtr5g2429 1013 PRINTS Disease resistance protein signature 253 267 - -
Mtr5g2429 1013 PRINTS Disease resistance protein signature 357 371 - -
Mtr5g2429 1013 PRINTS Disease resistance protein signature 949 965 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2429 Mtr-Chr5 31852942 31856227 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2429 183 867 WRKY Transcription Factor Family AT5G45050 22.455 1.26e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2429 - - mtr:MTR_5g071220 1319.29