Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2424 ATGGCAGAGGCCTTGCTAGGAGTTGTATTTGAGAATTTGTTATCTCTTGTTCAAAATGAATTTGCAACCATTTCTGGAATCACATCAAAGGCTGAAAAGTTGTCAACCACCTTGGATCTGATCAAGGCTGTTCTTGAAGATGCTGAGCAGAAACAGGTCACAGACCGCTCTATTAAGGTATGGCTCCAACAACTCAAAGATGCTGTATATGTGCTTGATGATATTCTTGATGAATGTTCCATTGAATCTAGTAGACTTAAAGCCTCGTCCTGTTTCAACCTAAAGAACATTGTGTTTCGCCGTGACATCGGCAAAAGGTTGAAAGAAATTACAAGGAGATTCGATCAAATTGCTGAAAGTAAAGACAAGTTTCTTTTACGAGAGGGTGTCGTTGTTAGGGAAAGGCCAAATGAAGTTGCTGAATGGCGCCAAACAAGCTCCATTATTGCTGAACCCAAAGTGTTTGGACGAGTAGATGATAGAGAGAGGATTGTCGAGTTTCTTCTCACCCAAGCGCAAGTATCTGACTTCCTATCCATCTATCCTATTGTTGGCCTAGGTGGTGTTGGTAAAACAACACTTGCTCAAATGGTCTACAATGATCATAGGGTAAGTAGCAATTTTAATACAAAAGTTTGGATTTGTGTTTCGGAGACTTTCTCTGTCAAAAGGATTTTGTGTTCCATTATAGAATCTATCACAAAAGACAAGTTTGATGCCTTGGATTTAGATGTAATACAAAGAAAAGCACGAGAACTATTGCAAGGTAAAAGATTTTTGCTGGTTTTGGATGATGTATGGAGCAGAAATCAAGGATTGGAACTAGGATTAAGCCAAGACAAATGGAACAAGTTGAAATCTGCGTTGTCATGTGGATCCAAAGGATCTTCCATTTTAGTTTCCACTCGTGATAAGGATGTTGCAGAAATCATGGGAACATGTTTAGCTCATCATTTATCTGGTCTCTCTGAAAACGAATGTTGGTTGTTGTTTAGACAATATGCATTTGGATGTGCTGGAGAAGAACGGGAAGAGCTTGTAGCAATAGGTAAGGCGATAGTAAAGAAGTGTGGAGGATTGCCTCTTGCAGCACAAGCATTGGGAGGTCTAATGCGCTCAAGGAGTGATGAAAATGAATGGCTTGAAATTAAAGACAGTAATCTCTGGACCTTACCATATGAGAATTCCATTTTGCCAGCCTTGAGGTTAAGCTACTTTCATTTAACACCGACCTTAAAGCGGTGTTTTGCTTTTTGTGCGATATTTCCCAAAGATATGGAAATTGTAAAGGAAGATTTGATTCATCTATGGATGGGCAATGGATTTATTTTCTCAAAGGCTAATTTGGATGTAGAATTTTTTGGCAATATGATTTGGAAGGAACTGTGCCAAAAATCATTCTTCCAAGACATCAAGATAGATGATTATTCAGGAGACATTACTTTCAAGATGCATGACCTAGTGCATGATCTTGCTCAATCAGTTATGGGGTCAGAGTGTATGATTTTGGAGAATACTAACACTAACTTGTTAAGAAGCACACACCATACTAGCTTTTACTCTGATATTAACTTGTTTTCCTTCAATGAGGCCTTCAAAAAAGTTGAATCCTTGCGAACGTTGTATCAACTAGAGTTTTACAGCGAAAAAGAATACGATTACTTCCCAACAAATCGCTCCCTTCGAGTTTTAAGCACAAACACTTTCAAGTTATCGTCACTTGGGAACTTAATTCATTTGAGGTATTTGGAGCTTCGTGATCTTGACGTAGAAACCCTTCCTGACTCAATTTATCGCTTGCAGAAATTGGAAATCTTGAAATTGAAATATTTTCGAAAACTGACTTTTCTACCAAAACACTTGACTTGTTTACAGAATCTCAGGCATCTTGTCATTGAAGATTGTAATTCATTGTCTTGTGTGTTTCCTTATATTGGAAAATTGTATTTCCTAAGAACATTAAGTGTATACATTGTTCAGTCAGAGAGGGGGTATGGCTTGGGAGAGCTACATGATCTATCACTTGGAGGAAAACTGAGCATACAAGGTCTGGGAAATGTTGGTAGCTTATTTGAAGCTCGACATGCCAATTTGATGGGTAAAAAGGACCTCCAAGAATTATCCTTGTCATGGAGGAATAATGGTGAAACTGAGACACCAACTACTACTGCTGAGCAAGTACTTGAAATGCTTCAACCTCACTCAAATCTCAAGAGGTTGAAAATACTTTACTATGACGGATTATGCTTGCCAAAATGGATTGGATTTCTTAATAGTTTAGTTGATCTTCAACTTCAGTATTGCAATAATTGTGTTCTTTCATCACTAGGTAAACTACCATCTCTAAAAAAGCTTGAATTATGGGGTATGAATAATATGCAATACATGGATGATGCTGAATATCATGATGGTGTAGAGGTGAGGGCTTTTCCATCCTTGGAAAAATTGTTACTAGCAGGACTACGAAACTTAGAGCGTTTGTTGAAAGTGCAAATAAGAGATATGTTCCTTCTTCTTTCTAATTTGACCATTATTGATTGCCCTAAACTTGTGTTGCCATGCCTTCCATCCCTTAAAGACCTCATTGTATTTGGATGTAACAATGAGTTACTGAGATCAATCTCCAATTTCTGTAGTCTTACCACCCTTCACCTTCTTAACGGTGAAGACGTGATTTGCTTTCCTGACGGTTTGTTAAGAAACTTGACTTGTCTTCGAAGTTTGAAAATTTCTAATTTCCCAAAATTGAAGAAACTACCAAATGAACCCTTCAACCTAGTGTTGGAGTGTCTGAGTATCTCTTCTTGTGGTGAGCTTGAGTCTATACCGGAACAAACATGGGAAGGTCTTCGATCTCTTCGAACTATTGATATTGGTTATTGTGGAGGATTGAGATCCTTTCCCGAATCTATTCAACACCTCACTTCACTTGAGTTTTTGAAAATTCGAGGTTGCCCAACATTAAAGGAGCGATTGAAGAAAGGAACCGGTGAGGACTGGGACAAGATAGCGCACATTCCAAAATTACATGTTGATTGA 3039 0.3827 MAEALLGVVFENLLSLVQNEFATISGITSKAEKLSTTLDLIKAVLEDAEQKQVTDRSIKVWLQQLKDAVYVLDDILDECSIESSRLKASSCFNLKNIVFRRDIGKRLKEITRRFDQIAESKDKFLLREGVVVRERPNEVAEWRQTSSIIAEPKVFGRVDDRERIVEFLLTQAQVSDFLSIYPIVGLGGVGKTTLAQMVYNDHRVSSNFNTKVWICVSETFSVKRILCSIIESITKDKFDALDLDVIQRKARELLQGKRFLLVLDDVWSRNQGLELGLSQDKWNKLKSALSCGSKGSSILVSTRDKDVAEIMGTCLAHHLSGLSENECWLLFRQYAFGCAGEEREELVAIGKAIVKKCGGLPLAAQALGGLMRSRSDENEWLEIKDSNLWTLPYENSILPALRLSYFHLTPTLKRCFAFCAIFPKDMEIVKEDLIHLWMGNGFIFSKANLDVEFFGNMIWKELCQKSFFQDIKIDDYSGDITFKMHDLVHDLAQSVMGSECMILENTNTNLLRSTHHTSFYSDINLFSFNEAFKKVESLRTLYQLEFYSEKEYDYFPTNRSLRVLSTNTFKLSSLGNLIHLRYLELRDLDVETLPDSIYRLQKLEILKLKYFRKLTFLPKHLTCLQNLRHLVIEDCNSLSCVFPYIGKLYFLRTLSVYIVQSERGYGLGELHDLSLGGKLSIQGLGNVGSLFEARHANLMGKKDLQELSLSWRNNGETETPTTTAEQVLEMLQPHSNLKRLKILYYDGLCLPKWIGFLNSLVDLQLQYCNNCVLSSLGKLPSLKKLELWGMNNMQYMDDAEYHDGVEVRAFPSLEKLLLAGLRNLERLLKVQIRDMFLLLSNLTIIDCPKLVLPCLPSLKDLIVFGCNNELLRSISNFCSLTTLHLLNGEDVICFPDGLLRNLTCLRSLKISNFPKLKKLPNEPFNLVLECLSISSCGELESIPEQTWEGLRSLRTIDIGYCGGLRSFPESIQHLTSLEFLKIRGCPTLKERLKKGTGEDWDKIAHIPKLHVD* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2424 1012 CDD RX-CC_like 2 119 IPR038005 -
Mtr5g2424 1012 Gene3D - 321 403 IPR042197 -
Mtr5g2424 1012 PANTHER OS05G0414200 PROTEIN 29 988 - -
Mtr5g2424 1012 Pfam Rx N-terminal domain 6 90 IPR041118 -
Mtr5g2424 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 419 IPR027417 -
Mtr5g2424 1012 Gene3D Ribonuclease Inhibitor 854 998 IPR032675 -
Mtr5g2424 1012 Gene3D Ribonuclease Inhibitor 666 853 IPR032675 -
Mtr5g2424 1012 Gene3D Ribonuclease Inhibitor 507 663 IPR032675 -
Mtr5g2424 1012 Gene3D - 404 495 IPR036388 -
Mtr5g2424 1012 SUPERFAMILY RNI-like 810 987 - -
Mtr5g2424 1012 Coils Coil 31 51 - -
Mtr5g2424 1012 Pfam NB-ARC domain 161 385 IPR002182 GO:0043531
Mtr5g2424 1012 SUPERFAMILY L domain-like 483 846 - -
Mtr5g2424 1012 Gene3D - 137 315 IPR027417 -
Mtr5g2424 1012 PANTHER DISEASE RESISTANCE PROTEIN RP 29 988 IPR044974 GO:0006952
Mtr5g2424 1012 Gene3D - 6 120 - -
Mtr5g2424 1012 PRINTS Disease resistance protein signature 180 195 - -
Mtr5g2424 1012 PRINTS Disease resistance protein signature 253 267 - -
Mtr5g2424 1012 PRINTS Disease resistance protein signature 357 371 - -
Mtr5g2424 1012 PRINTS Disease resistance protein signature 948 964 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2424 Mtr-Chr5 31806448 31809900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2424 183 499 WRKY Transcription Factor Family AT5G45050 25.472 3.76e-08 55.8