Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2422 ATGAACCATCAATGGATATACGACGTGTTCATAAATTTCAGAGGGGACGACAGTCGTAATAGCTTGGTTTCTCATCTGTACGCTGCTCTCTCAAACGCGCGAATCAACACATTTCTTGACGATGAGAAGCTTCACAAGGGATCGGAGCTGCAACCACAACTATTGAGAGCAATACAAGGGTCTCAGATCTGTTTAGTTGTTTTCTCGGAGAATTACAGTAGATCTAGTTGGTGTCTTCTTGAACTTGAAAAAATCATGGAAAACCGTGGTACTCATGGTCAAATAGTTATACCAATATTTTACCATATTGATCCAGCCATTGTTCGTCGTCAGTTAGGTAATTTTGGAAAAGCTTTAGAAATTACAGCTAAAAAAATGCAATCAAAAAGGGAGAAGCAAAAACTGTTGTTGCAGACGTGGAAGTCTGCTCTTAGCCAAGCTACAAATTTATCTGGCTGGGATGTCACCTCTTCCAGGAATGAAAGTGAACTGGTGCAAAAAATTGTTGAGGAGGTATTGGCAAAGCTAGACAACACATTCATGCCTCTTCCTGAGCACACGGTTGGACTAGAGTCCCGTGTTGAGAAAATGGTTCCATGGATTGAAAATAATTCAACAAAGGTTTGTATGATAGGCATATGGGGAATGGGAGGGTTGGGTAAAACTACGGCAGCCAAAGCCATCTACAATCAAATTCATCGCAAATTTGTGTACAGAAGTTTCATCGAAAATATTAGAGAAACTTGTGAAAGGGATAGCAAAGGCGGATGGCATATTTGTTTACAACAACAACTTCTTTCAGATCTTCTCAAAACAAAGGAGAAGATACACAACATTGCCTCTGGGACAATTGCAATCAAGAAAATGCTCTCTGCAAAAAAGGTGCTCATTGTACTTGATGATGTGACCAAAGTAGAGCAGGTAAAAGCCCTATATGAAAGTCGTAAGTGGTTTGGTGCAGGAAGTGTATTAATTGTTACAAGCAGGGATGCACACATACTTAAGTCACTTCAAGTTGACCATGTCTATCCAGTTAACGAGATGGATCAAAAGGAGTCCCTCGAGCTTTTCAGCTGGCATGCGTTTAGACAGGCAAGTCCAAGAGCAGACTTCAGTGAGCTCTCAAGTAGTGTAATTAAGTACTGTGGAGGACTACCCTTGGCTGCTGAAGTCATCGGATCTTATTTATATGGCAGGACAAGAGAAGAATGGACAAGTGTGCTATCAAAACTAGAGATAATTCCTGACCATCATGTGCAAGAGAAACTAAGAATAAGCTACGATGGTCTAAGTGATGGTAAGCAAAAGGATATATTTCTTGACATATGTTGTTTCTTTATCGGCAAGGACAGAGCTTATGTTACTGAGATTCTAAATGGCTGTGGACTTTTTGCTAGTATTGGAATATCTGTCCTCATAGAGCGGAGCCTCTTAAAAGTTGAAAAGAATAACAAGCTTGGAATGCATGATTTAATAAGAGACATGGGAAGAGAAATTGTTCGTCAAAATTCAGAAAAAGATGTTCGCCAAATTTCAGAAAAAGATCCAGGGGAGCGTAGTCGGTTGTGGTTTCAGAAAGATGTACATGATGTTTTGACAAATAATACTGGAACAAAAACTGTTGAGGGTTTGGTTTTAAACTTGGAAACAACAAGCAGAGCTAGCTTTAATACTAGTGCTTTTCAGGAGATGAAGAAACTGAGACTTTTACAACTTGATTGTGTTGACCTCACTGGAGATTTTGGGTTTCTTTCCAAACAACTGAGATGGGTCAATTGGCGACAATCTACCTTCAACCATGTTCCCAACAACTTTTATCAAGGAAATCTAGTTGTTTTTGAATTAAAATATAGCATGGTTAAACAAGTTTGGAAGGAGACCCCGTTTCTGGACAAGCTAAAAATTCTCAACCTCAGTCATTCCAAGTACTTGAAAAACACCCCTAACTTTTCATTATTACCGAGTCTAGAAAAGCTCATTATGAAGGATTGTCCAAGTTTGTCCGAGGTACACCCGTCCATTGGAGATCTCAATAATCTTCTTCTGATAAATTTTAAGGATTGTACAAGTCTTGGCAATCTACCAAGAGAGATATCTCAATTGATGTCTGTGACAACTCTCATACTTGATGGTTGTTCAAACATTACTGAATTGGAAGAAGATGTAGTGCAAATGAAATCCTTGAAAACTCTAATGGCAGCAAGAACTGGTATAGAAAAAGCACCTTTTTCCATAGTTAGTTCGAAAAGCATTGTTTATATATCCCTGTGTGGATTTGAAGGATTTGCACGTGATGTTTTTCCTTGTCTCATACGGTCTTGGATGTCACCAACAATAAATTCCTTACCACATATCCCTCACATGTCCTTGGGTGTAGAGAGTAATGATTTGCGTTTGGGCAATCAATCATCAACGCTTAGAAGCTGTTCAACACCTAGAAGTGTTTGGGTACAATGCTGCTCCGATATTCAATTAACTGAAGAATTAAAAAGATTACTTAATGATCTAAACAGTGTGGATTTTACTGAATCAGAAACTTCACATGCATTACAAATCTCAGATCTATCATTGAAATCTTTTGTTATTACTCTTGGCAAGAGCTTATCACAGGGATTAACAACCACAACCACTGGTTCCAATGATTGTTTTGTTCTGGTTAACAATTATCCTTCTGGGTTATCTTATACATGTACAGGACCTTCAGTCCGATTTCGAGTGCCTGAGGATAGTGATTGTCACATGAAGGGAATTACTTTATGTGTTGTTTATTCATCAACATTTGAAAACATGGAAACTGAATGCCTCGTTGGTGTTTTGATTATTAATTATACAAAATTCACTATCAATTTATACAAGCGAGACACAGTAATGTCCTTTAACGATGAAGATTGGCAGGGTGTAAAATCAAATTTAGGAGCTGGTGACAATATGGAGATTTTTGTAGCTTTAGGGAATGGTATGACTGTTAAAGAAACAGGTGTCCATCTTGTACATGGCCAATCAAGTACTATGGAAGTTGAGTCGTCGTCAATGACCATGGAAGTTGAGCAATCTATTATGGTAAAAATGGAGCCATTGCCCGAAGTGGAAGTGCAAACGCAGCCTAATGTGAAAATAGATCCATCACCTGAAGAGGAAGTACAATCATCCCTTGATGTGAAAAATGAGGCATCACTTATTATCCAGAATGAACCATCACTGGAGCCATCGCTTACTGTCCAGGACGAGTCATCACCGAAGCCAAATGAAAACATCTTTGCAAAACTTGGAAAGAGAGTTGGTAAATGTGTATGCTTGAAACTATAG 3306 0.3869 MNHQWIYDVFINFRGDDSRNSLVSHLYAALSNARINTFLDDEKLHKGSELQPQLLRAIQGSQICLVVFSENYSRSSWCLLELEKIMENRGTHGQIVIPIFYHIDPAIVRRQLGNFGKALEITAKKMQSKREKQKLLLQTWKSALSQATNLSGWDVTSSRNESELVQKIVEEVLAKLDNTFMPLPEHTVGLESRVEKMVPWIENNSTKVCMIGIWGMGGLGKTTAAKAIYNQIHRKFVYRSFIENIRETCERDSKGGWHICLQQQLLSDLLKTKEKIHNIASGTIAIKKMLSAKKVLIVLDDVTKVEQVKALYESRKWFGAGSVLIVTSRDAHILKSLQVDHVYPVNEMDQKESLELFSWHAFRQASPRADFSELSSSVIKYCGGLPLAAEVIGSYLYGRTREEWTSVLSKLEIIPDHHVQEKLRISYDGLSDGKQKDIFLDICCFFIGKDRAYVTEILNGCGLFASIGISVLIERSLLKVEKNNKLGMHDLIRDMGREIVRQNSEKDVRQISEKDPGERSRLWFQKDVHDVLTNNTGTKTVEGLVLNLETTSRASFNTSAFQEMKKLRLLQLDCVDLTGDFGFLSKQLRWVNWRQSTFNHVPNNFYQGNLVVFELKYSMVKQVWKETPFLDKLKILNLSHSKYLKNTPNFSLLPSLEKLIMKDCPSLSEVHPSIGDLNNLLLINFKDCTSLGNLPREISQLMSVTTLILDGCSNITELEEDVVQMKSLKTLMAARTGIEKAPFSIVSSKSIVYISLCGFEGFARDVFPCLIRSWMSPTINSLPHIPHMSLGVESNDLRLGNQSSTLRSCSTPRSVWVQCCSDIQLTEELKRLLNDLNSVDFTESETSHALQISDLSLKSFVITLGKSLSQGLTTTTTGSNDCFVLVNNYPSGLSYTCTGPSVRFRVPEDSDCHMKGITLCVVYSSTFENMETECLVGVLIINYTKFTINLYKRDTVMSFNDEDWQGVKSNLGAGDNMEIFVALGNGMTVKETGVHLVHGQSSTMEVESSSMTMEVEQSIMVKMEPLPEVEVQTQPNVKIDPSPEEEVQSSLDVKNEASLIIQNEPSLEPSLTVQDESSPKPNENIFAKLGKRVGKCVCLKL* 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2422 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 442 IPR027417 -
Mtr5g2422 1101 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 999 IPR044974 GO:0006952
Mtr5g2422 1101 Gene3D - 3 173 IPR035897 -
Mtr5g2422 1101 Pfam TIR domain 7 179 IPR000157 GO:0007165
Mtr5g2422 1101 Gene3D - 174 342 IPR027417 -
Mtr5g2422 1101 PRINTS Disease resistance protein signature 210 225 - -
Mtr5g2422 1101 PRINTS Disease resistance protein signature 289 303 - -
Mtr5g2422 1101 PRINTS Disease resistance protein signature 382 396 - -
Mtr5g2422 1101 PRINTS Disease resistance protein signature 628 644 - -
Mtr5g2422 1101 ProSiteProfiles TIR domain profile. 5 176 IPR000157 GO:0007165
Mtr5g2422 1101 Pfam NB-ARC domain 192 412 IPR002182 GO:0043531
Mtr5g2422 1101 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 153 IPR035897 -
Mtr5g2422 1101 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 999 - -
Mtr5g2422 1101 Gene3D - 347 431 IPR042197 -
Mtr5g2422 1101 SMART till_3 6 150 IPR000157 GO:0007165
Mtr5g2422 1101 SUPERFAMILY L domain-like 488 790 - -
Mtr5g2422 1101 Gene3D Ribonuclease Inhibitor 490 731 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2422 Mtr-Chr5 31742812 31748798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2422 7 745 WRKY Transcription Factor Family AT4G12020 29.211 3.35e-77 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2422 - - mtr:MTR_8g011710 1173.69