Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2419 ATGGCCGAAGCTTTACTTAGAGCTGCGTTTGAGAAAGTGAATTCTCTCCTACAAAGTGAATTTTCTACCATTTCTGGAATCAAGTCAAAGGCCAAAAACCTATCAACCTCCTTAAATCACATCGAGGCTGTTCTTGTAGATGCTGAGAAGAGACAAGTCAAAGACAGCTATATTAAGGTATGGCTCCAACAACTCAAAGATGCTGTTTATGTGCTCGATGATATCCTTGATGAGTGTTCGATCGAGTCTGCTCGACTTGGAGGCTCATTCTCTTTCAACCCAAAGAACATCGTGTTTCGCCGTCAGATCGGCAACAGGTTGAAAGAGATTACAAGAAGATTGGATGATATTGCTGATATTAAGAACAAATTTCTTCTACGAGATGGTACTGTATATGTTAGGGAAAGCTCAGATGAAGTAGATGAATGGCGTCAAATCAACTCCATTATTGCTAAACCAGAAGTGTTTGGACGAAAAGATGATAAAGAAAAGATTTTTGAGTTTCTTCTCACCCATGCGAGGGACTCTGACTTCCTTTCCGTCTACCCCATTGTTGGTTTAGGTGGTATTGGTAAAACAACTCTTGTTCAATTGGTCTACAATGATGTTAGGGTGAGGGACTATTTTGACATAAGATCTTGGGTTTGTGTTTCCGAGACTTTCTCTGTCAAGAGGATTTTGTGTTCTATTATAGAATATATTACAGGAGAGATATGTGATGCCTTGGATTCAGATGTAATACAAAGAAAGGTGCAAGAATTGTTGCAAGGGAGAATATATTTGCTGATTTTGGATGATGTGTGGAATCAAAATGAACAATTGGAATCTGGGTTAACACAAGATAGATGGAATCGTTTGAAATCTGTTTTGTCGTGTGGATCAAAAGGTAGTTCCATTTTAGTGTCCACCCGTGATAAAGTTGTTGCAACAATCATGGGAACATGCCAAGCTCACTCTTTGTCTGGTCTCTCTGATAGTGAATGTTGGTTGTTGTTCAAAGAATATGCATTGGGACATTATAGAGAAGAGCGTGCAGAACTTGTAGCAATAGGAAAGGAGATAGTAAAGAAATGTAATGGATTGCCTCTTGCAGCAAAAGCATTGGGAGGTTTGATGAGCTCAAGGAATGGAGAAAAGGAATGGCTTGATATTAAAGACACTGAGCTTTGGGCTTTACCAGAAGAAAATTATATTTTGCGTTCTTTGAGGTTGAGTTACTTTTATTTAACACCGACCCTAAAGCAATGTTTCTCTTTTTGTGCTATATTTCCCAAGGATAGGGAAATCTTGAAAGAAGAATTGATTCAGCTTTGGATGGCTAATGGATTGATTTCATCTTGGGGTAATACGGAGGTTGAAGATGTTGGCATCATGGTTTGGGATGAATTGTACCAAAAATCATTCTTTCAAGACAAAAAAATGGATGAATTTTCTGGCAACATTTCATTCAAGATGCATGATCTTGTCCATGATCTCGCTAAGTCAGTAATGGGGCAAGAATGTATATATTTGGAGAATGCAAACATGACTAGTTTGTCAAAAAGCACACACCACATAAGTTTTAACTCTGATAATTTGTTATCATTCGATGAGGGTGCCTTCAGAAAAGTTGAATCCTTGCGAACATGGTTTGAGTTTTCTACTTTTCCAAAAGAAGAACAGGATTACTTCCCAACAGACCCTTCTCTTCGGGTTTTATGCACAACCTTTATCCGGGGGCCATTACTAGGTAGTTTAATTCATTTAAGGTATTTGGAGCTTCTTTATCTTGACATACAAGAGTTGCCTGACTCAATTTACAACTTACAAAAACTGGAAACCTTGAAAATAAAACATTGTGGTGAACTGATTTGTCTCCCAAAACGCTTGGCTTTCTTACAAAATCTTAGACATATAGTTATTGAATATTGTATATCTTTGTCTCGAATGTTTCCTAACATTGGAAAATTAACTAGTCTAAAAACATTAAGTGTGTACATTGTTAGTTTAGAGAAAGGGAATAGCTTGTCAGAGTTACGTGATCTAAACCTCGGTGGAAAACTGCGTATCGAAGGCTTAAAAGATTTTGGCAGTTTATCTCAAGCTCAAGCGGCTGATTTGATGGGTAAAAAAGACCTTCATGAATTATGCTTGTCATGGGAAAGCAACTATGGATTTACCAATCCCCCAACTATTAGTGCTCAGCAAGTACTCGAAGTGCTTCAACCTCACTCAAATCTCAAGTGCTTGAAAATAAATTACTATGACGGATTATCATTACCAAGTTGGATAATTATTCTTAGTAATTTAGTTTCTCTTGAACTTGGGAATTGCAAGAAAGTTGTGCGACTTCAGTTAATTGGTAAACTACCGTCTCTAAAAAAACTGGAATTATCTGATATGGATAATCTGAAATACTTGGATGATGATGAATCTCAGGATGGTGTGGAGGTGAGGGTTTTCCCATCTCTGGAGGAACTCCATTTACTATGCCTACCAAACATAGAGGGGTTATTGAAAGTGGAAAGAGGGGAGATGTTTCCTTGTCTTTCTGAGTTGAGAATCACAGCTTGCCCTAAACTTGGAGTGCCATGTCTTCCATCTCTTAAATCCCTCTATGTATTGGGATGTAACAATGAGTTACTGAGGTCAATCTCTACCTTCCGTGGTCTTACTGAGCTTTCCCTAGATTACGGTAGAGGAATAACATCCTTCCCAGAGGGGATGTTCAAAAACCTTACTTCTCTTCAATCACTGGTTGTAAATGATTTCCCAACACTGAAGGAGTTACAAAATGAACCCTTTAACCAAGCTTTGACGCATCTGCGTATCTCTGATTGTAATGAGCAAAATTGGGAAGGTCTGCAATCCCTTCAATATCTATATATTTCTAATTGTAAAGAATTGCGATGCTTTCCGGAGGGTATTAGACACCTCACTTCTCTTGAGGTTCTGACAATCAATGATTGCCCAACATTAAAGGAACGATGCAAAGAGGGAACAGGGGAGGATTGGGACAAGATAGCTCATATTCCAAAAATACAGTTGGAGTAG 3033 0.3831 MAEALLRAAFEKVNSLLQSEFSTISGIKSKAKNLSTSLNHIEAVLVDAEKRQVKDSYIKVWLQQLKDAVYVLDDILDECSIESARLGGSFSFNPKNIVFRRQIGNRLKEITRRLDDIADIKNKFLLRDGTVYVRESSDEVDEWRQINSIIAKPEVFGRKDDKEKIFEFLLTHARDSDFLSVYPIVGLGGIGKTTLVQLVYNDVRVRDYFDIRSWVCVSETFSVKRILCSIIEYITGEICDALDSDVIQRKVQELLQGRIYLLILDDVWNQNEQLESGLTQDRWNRLKSVLSCGSKGSSILVSTRDKVVATIMGTCQAHSLSGLSDSECWLLFKEYALGHYREERAELVAIGKEIVKKCNGLPLAAKALGGLMSSRNGEKEWLDIKDTELWALPEENYILRSLRLSYFYLTPTLKQCFSFCAIFPKDREILKEELIQLWMANGLISSWGNTEVEDVGIMVWDELYQKSFFQDKKMDEFSGNISFKMHDLVHDLAKSVMGQECIYLENANMTSLSKSTHHISFNSDNLLSFDEGAFRKVESLRTWFEFSTFPKEEQDYFPTDPSLRVLCTTFIRGPLLGSLIHLRYLELLYLDIQELPDSIYNLQKLETLKIKHCGELICLPKRLAFLQNLRHIVIEYCISLSRMFPNIGKLTSLKTLSVYIVSLEKGNSLSELRDLNLGGKLRIEGLKDFGSLSQAQAADLMGKKDLHELCLSWESNYGFTNPPTISAQQVLEVLQPHSNLKCLKINYYDGLSLPSWIIILSNLVSLELGNCKKVVRLQLIGKLPSLKKLELSDMDNLKYLDDDESQDGVEVRVFPSLEELHLLCLPNIEGLLKVERGEMFPCLSELRITACPKLGVPCLPSLKSLYVLGCNNELLRSISTFRGLTELSLDYGRGITSFPEGMFKNLTSLQSLVVNDFPTLKELQNEPFNQALTHLRISDCNEQNWEGLQSLQYLYISNCKELRCFPEGIRHLTSLEVLTINDCPTLKERCKEGTGEDWDKIAHIPKIQLE* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2419 1010 Gene3D - 322 405 IPR042197 -
Mtr5g2419 1010 CDD RX-CC_like 2 119 IPR038005 -
Mtr5g2419 1010 PANTHER OS05G0414200 PROTEIN 28 961 - -
Mtr5g2419 1010 Pfam Rx N-terminal domain 6 87 IPR041118 -
Mtr5g2419 1010 PRINTS Disease resistance protein signature 181 196 - -
Mtr5g2419 1010 PRINTS Disease resistance protein signature 254 268 - -
Mtr5g2419 1010 PRINTS Disease resistance protein signature 358 372 - -
Mtr5g2419 1010 PRINTS Disease resistance protein signature 781 797 - -
Mtr5g2419 1010 SUPERFAMILY L domain-like 809 987 - -
Mtr5g2419 1010 Gene3D Ribonuclease Inhibitor 498 666 IPR032675 -
Mtr5g2419 1010 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 420 IPR027417 -
Mtr5g2419 1010 Gene3D - 406 496 IPR036388 -
Mtr5g2419 1010 Coils Coil 31 51 - -
Mtr5g2419 1010 Pfam NB-ARC domain 159 386 IPR002182 GO:0043531
Mtr5g2419 1010 Gene3D - 6 120 - -
Mtr5g2419 1010 PANTHER DISEASE RESISTANCE PROTEIN RP 28 961 IPR044974 GO:0006952
Mtr5g2419 1010 SUPERFAMILY L domain-like 484 851 - -
Mtr5g2419 1010 Gene3D Ribonuclease Inhibitor 667 856 IPR032675 -
Mtr5g2419 1010 Gene3D Ribonuclease Inhibitor 857 994 IPR032675 -
Mtr5g2419 1010 Gene3D - 137 317 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2419 Mtr-Chr5 31725424 31730210 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2419 184 917 WRKY Transcription Factor Family AT5G45050 22.494 3.98e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2419 - - mtr:MTR_5g071220 1406.35