Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2405 ATGGCTGACGCCTTACTTGGAGTTGTGTTACAGAATTTGAAGTCTCTTGTTCAAAATGAATTGGCCACCATTTCTGGAATCAAGTCCAAGGCTCAGAAGCTTTCAACCACCTTAGATTTGGTCAACGCTGTTCTTGAAGATGCTGAGCAGAAGCAAGTCATCAATCGCTCTATAAAGGTATGGCTACAACAACTCAAAGATGCTGTTTATGTGCTCGATGATATCCTTGATGAGTGCTCGATCGAGTCTGCTCGACTTATTGCCTCATCATCTTTCAAACCAAAGAACATCATTTTTTGTCGTGAGATTGGCAAAAGATTGAAAGAGATTACAAGGAGGTTAGATGATATTGCTGAAAGTAAAAACAAGTTTCATTTAGGAGAGAATGGAACTTTTAGGGAAAGATCAATTGAAGTAGCAGAATGGCGTCAAACTAGCTCTATTATTGCTGAACCAAAAGTATTTGGGCGAGAAGATGATAAAGAGAAGATTATCGAGTTTCTTCTCACCCAAGCGAGGGACTCCGACTTCCTTTCCGTCTATCCCATTGTTGGTTTAGGTGGTGTTGGAAAAACAACTCTTGTTCAATTGGTCTACAATGATGCTAGGGTGAGTAGCAATTTTAATACAAAAATATGGGTTTGTGTTTCCGAGACTTTCTCGGTCAAGAGGATTTTGTGCTCCATTATAGAATCTATCACAAGAGAGAAGTATGACGGCTTCAATTTAGATGTAATACAAAGAAAGGTGCAGGAATTGCTGCAAGGTAAAATATATTTGCTGATTTTGGATGATGTGTGGAACAAAAATCAGCAATTGGAATTCGGATTAAGCCAAGAGAAATGGAATATACTGAAATCAGTGTTATCGTGTGGATCCAAAGGTAGTTCCATTTTAGTGTCCACTCGTGATGAGGTTGTTGCGACGATCATGGGAACATGCCACGCTCATCCTTTATATGTTCTCTCTGATAATGAATGTTGGTTGTTGTTCAAACAATATGCATTTGGACAAAATAGAGAAGAGCGTGCAGAGCTTGTGGAAATAGGAAAGGAGATAGTAAAGAAATGTGATGGATTGCCTCTTGCAGCACAAGCATTGGGAGGTCTAATGAGTTCAAGGAATGAAGAAAAAGAATGGCTTGAAATTAAAGAGAGTGAACTTTGGGCTTTACCACATGAGAATTATATTTTACCTGCTTTGAGGTTGAGCTACTTTCATTTAACTCCAACCTTAAAGCGGTGTTTCGCTTTTTGTGCTATGTTTCCCAAAGATACAGAATTCGTGAGGGAAGAATTGATTCATCTTTGGATGGCTAATGAATTTATTTTATCTAGGGAAAATATGGAGGTTGAAGATGTTGGCAGCATGGTTTGGAATGAATTGTGCCAAAAATCTTTCTTTCAAGACATCAAGATGGACAACGGTTCTGGAGACATTTCTTTCAAGATGCATGATCTTGTCCATGATCTTGCTCAATCAGTAATGGGTCAAGAATGTATGTATTTGGAGAATTCAAACATGACTACTTTGTCAAAAAGCACACACCACATAAGTTTTCACTATGATGACGTGTTATCATTCGACGAGGGTGCCTTCAGGAAAGTTGAATCCTTGAGAACATTGTTTCAGTTGAATCATTACACCAAAACAAAACATGATTACTCGCCAACAAACCGTTCCCTTCGGGTTTTATGCACATCCTTTATCCAGGTACCATCACTAGGGAGTTTAATTCATTTAAGGTATTTGGAACTTCGTTCTCTTGAAATAAAAATGTTGCCGGACTCAATTTACAACTTACAAAAACTGGAAATCTTGAAAATAAAAGATTGTCAAAAACTTAGCTGTCTTCCGAAAGGCTTGGCTTGTTTACAGAATCTCAGACATCTTGTCATTAAAGATTGCCATTCATTGTTTCACATGTTTCCATACATTGGAAAATTAACCTGTCTAAGAACATTAAGTGTGTACATTGTTAGTTTAGAGAAAGGGAATAGCTTGGCAGAGTTACACGATCTAAACCTGGGAGGAAAACTAAGTATCAAAGGTTTAAATGATGTTTGTAGTTTATCTGAAGCTCAAGCAGCCAATTTGATGGGTAAAAAAGACCTCCAGGAATTATGTTTTTCGTGGACCAGCAATGACGGATTTACGAAGACCCCTACTATTAGTTTTGAGCAACTATTTGAAGTGCTTCAACCTCACTCAAATCTCAAGAGGTTGATAATTTGTCACTATAACAGATTATTCTTACCAAGTTGGATAAGTATTCTCAGTAATTTAGTTGCTCTTGTACTTTGGAATTGTGAGAAATGTGTGCGGCTTCCGTCATTTGGTAAACTACAATCTTTGAAAAAACTCGCTTTGCATAATATGAATGATTTGAAATACTTGGATGATGATGAAGAATCTCAAGATGGTATTGTGGCGAGGATTTTCCCATCTCTGGAGGTACTCATATTAGAAATCCTACCAAACTTAGAAGGGTTATTGAAAGTGGAAAGAGGTGAGATGTTTCCTTGTCTTTCTCGTTTAACCATCTCCTTTTGCCCTAAACTTGGACTGCCATGTCTTGTATCTCTTAAAAACCTAGATGTATTGGGATGTAACAATGAGTTGCTGAGGTCAATCTCTAGCTTTTGTGGTCTTAACAGCCTTACCCTCGCTGGAGGTAAAAGAATAACATCCTTCCCGGACGGGATGTTCAAAAACCTTACTTGTCTTCAAGCTCTTGATGTGAATGATTTTCCAAAAGTGAAGGAGTTACCAAATGAACCATTTAGCCTAGTTATGGAGCATCTGATAATCTCTTCATGTGATGAGCTTGAGTCTTTACCAAAGGAAATTTGGGAAGGTCTGCAATCCCTCCGAACTCTAGATATTTGTCGTTGTAAAGAACTGAGATGCTTACCGGAAGGTATTCGACATCTCACTTCTCTGGAGCTTCTGACAATTCGTGGTTGTCCAACACTAGAAGAGCGATGCAAGGAGGGAACAGGAGAGGACTGGTACAAGATATCGCATATTCCGATATTAAAGATTTTGTGA 3051 0.3835 MADALLGVVLQNLKSLVQNELATISGIKSKAQKLSTTLDLVNAVLEDAEQKQVINRSIKVWLQQLKDAVYVLDDILDECSIESARLIASSSFKPKNIIFCREIGKRLKEITRRLDDIAESKNKFHLGENGTFRERSIEVAEWRQTSSIIAEPKVFGREDDKEKIIEFLLTQARDSDFLSVYPIVGLGGVGKTTLVQLVYNDARVSSNFNTKIWVCVSETFSVKRILCSIIESITREKYDGFNLDVIQRKVQELLQGKIYLLILDDVWNKNQQLEFGLSQEKWNILKSVLSCGSKGSSILVSTRDEVVATIMGTCHAHPLYVLSDNECWLLFKQYAFGQNREERAELVEIGKEIVKKCDGLPLAAQALGGLMSSRNEEKEWLEIKESELWALPHENYILPALRLSYFHLTPTLKRCFAFCAMFPKDTEFVREELIHLWMANEFILSRENMEVEDVGSMVWNELCQKSFFQDIKMDNGSGDISFKMHDLVHDLAQSVMGQECMYLENSNMTTLSKSTHHISFHYDDVLSFDEGAFRKVESLRTLFQLNHYTKTKHDYSPTNRSLRVLCTSFIQVPSLGSLIHLRYLELRSLEIKMLPDSIYNLQKLEILKIKDCQKLSCLPKGLACLQNLRHLVIKDCHSLFHMFPYIGKLTCLRTLSVYIVSLEKGNSLAELHDLNLGGKLSIKGLNDVCSLSEAQAANLMGKKDLQELCFSWTSNDGFTKTPTISFEQLFEVLQPHSNLKRLIICHYNRLFLPSWISILSNLVALVLWNCEKCVRLPSFGKLQSLKKLALHNMNDLKYLDDDEESQDGIVARIFPSLEVLILEILPNLEGLLKVERGEMFPCLSRLTISFCPKLGLPCLVSLKNLDVLGCNNELLRSISSFCGLNSLTLAGGKRITSFPDGMFKNLTCLQALDVNDFPKVKELPNEPFSLVMEHLIISSCDELESLPKEIWEGLQSLRTLDICRCKELRCLPEGIRHLTSLELLTIRGCPTLEERCKEGTGEDWYKISHIPILKIL* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2405 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 419 IPR027417 -
Mtr5g2405 1016 CDD RX-CC_like 2 119 IPR038005 -
Mtr5g2405 1016 PANTHER DISEASE RESISTANCE PROTEIN RP 29 970 IPR044974 GO:0006952
Mtr5g2405 1016 Gene3D - 404 495 IPR036388 -
Mtr5g2405 1016 Pfam Rx N-terminal domain 6 87 IPR041118 -
Mtr5g2405 1016 Gene3D - 6 118 - -
Mtr5g2405 1016 Pfam NB-ARC domain 157 385 IPR002182 GO:0043531
Mtr5g2405 1016 Gene3D - 321 403 IPR042197 -
Mtr5g2405 1016 Gene3D - 137 315 IPR027417 -
Mtr5g2405 1016 Coils Coil 31 51 - -
Mtr5g2405 1016 Gene3D Ribonuclease Inhibitor 666 859 IPR032675 -
Mtr5g2405 1016 Gene3D Ribonuclease Inhibitor 860 999 IPR032675 -
Mtr5g2405 1016 Gene3D Ribonuclease Inhibitor 498 665 IPR032675 -
Mtr5g2405 1016 PANTHER OS05G0414200 PROTEIN 29 970 - -
Mtr5g2405 1016 SUPERFAMILY L domain-like 476 1008 - -
Mtr5g2405 1016 PRINTS Disease resistance protein signature 180 195 - -
Mtr5g2405 1016 PRINTS Disease resistance protein signature 253 267 - -
Mtr5g2405 1016 PRINTS Disease resistance protein signature 357 371 - -
Mtr5g2405 1016 PRINTS Disease resistance protein signature 952 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2405 Mtr-Chr5 31528873 31536657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2405 183 657 WRKY Transcription Factor Family AT5G45050 22.374 2.06e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2405 - - mtr:MTR_5g071220 1999.94