Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2396 ATGTCTTTTGCAGTAACAACAATAATATTTGCTTTTCTTCTCTTCACTTTCATGTACTTTCTATTCAAACTCTTCTTACATTCAAAACAAAAAACCATTATCCATGAAAAACCACCAGGTCCACCAACACTACCAATAATAGGGAACCTTCACATATTAGGCACCCTTCCACATAGAACACTTCAGTCACTCTCCAAAAAATATGGTCCAATCATGTCCTTACAACTTGGTCAAGTCCCAGCTATTGTCATTTCATCTTCAAAAGCAGCAGAATCATTCCTCAAAACCCACGACATCGTTTTCGCAAGCCGACCAAAGATTCAAGGATCTGAGCTCATGTCTTATGGTTCCAAAGGGATGGCTTTTTGTGAGTATGGTCCTTATTGGCGTAGTGTGAGGAAATTTTGCACTTTGAAACTTCTTAGTGCTTCAAAAGTTGAGATGTCTGGTCCTATTAGAAAAGAGGAGTTGAGTATTTTGGTTAACACTTTGAAGAAAGCTGCTTTGGTTGGTGAGGTTGTGAATGTTAGTGAGGTTGTAGAGAATCTAATAGAAGATATTGTGTATAAGTTGATGTTTGGTCGGAGTAAGTATGAGCAATTTGACTTGAAGAGTTTGGTTCAAGAAGGATTGGCTTTGATTGGAGCTTTTAATCTGGCTGATTATGTTCCTTGGCTAGGAATTTTTGATCTTCAGGGATTAACAAAATCTTGCAAGAAAGTCAGTAAAGCACTTGATGAGGTGCTAGAGGTGATATTAACAGAACATGAACAAGCTGCTAATGTAAACAAAACTCAAAAAGATTTTGTAGACATACTTCTTTCAATTATGCACCAAACCATTGATATTGAGGGTGAACAAAATCTCGTCATTGATCGAACTAACATCAAGGCTATTTTGCTCGACATGATAGTGGCAGCAATTGATACATCTGCTACCTCGATTGAATGGGCTTTATCTGAACTTTTAAGACATCCAAGAGTGATGAAAAAGCTTCAAGATGAGATACAAAATGAAGTAGGAAATAAAAGAATGGTTAACGAGAAGGATCTAAAGAAGTTGAATTATTTAGATATGGTGGTTGATGAGACCTTAAGACTTTACCCCGTAGCACCGTTACTAGTCCCTCGTGAATCTAGAGAGAGCACAACAATTGATGGTTATTTTATAAAGGAAAAGACACGACTTATAGTAAATGCATGGGCAATAGGGAGAGATCCTAATGTTTGGTCAGAAAATGCTAAAGAATTTTACCCAGAGAGATTTGTAGAGAAAAAAATGAATTATCTTGGACAAGAGTTTGAATCTATACCATTTGGTTCTGGTCGTAGGCGTTGTCCTGGAATTCAATTGGGTTTAATTACTGTTAAATTGGTTATAGCTCAATTTATCCATTGTTTTAACTGGGAACTTCCACATAATATTAGTCCCTCCAATTTGAATATGGAGGAGAAATTTGGACTCACTATACCAAGAGCTCAGCATTTGCACGCAATACCGAGTTATCGTTTGAATGATGCTAAGCTTGAATAG 1533 0.3686 MSFAVTTIIFAFLLFTFMYFLFKLFLHSKQKTIIHEKPPGPPTLPIIGNLHILGTLPHRTLQSLSKKYGPIMSLQLGQVPAIVISSSKAAESFLKTHDIVFASRPKIQGSELMSYGSKGMAFCEYGPYWRSVRKFCTLKLLSASKVEMSGPIRKEELSILVNTLKKAALVGEVVNVSEVVENLIEDIVYKLMFGRSKYEQFDLKSLVQEGLALIGAFNLADYVPWLGIFDLQGLTKSCKKVSKALDEVLEVILTEHEQAANVNKTQKDFVDILLSIMHQTIDIEGEQNLVIDRTNIKAILLDMIVAAIDTSATSIEWALSELLRHPRVMKKLQDEIQNEVGNKRMVNEKDLKKLNYLDMVVDETLRLYPVAPLLVPRESRESTTIDGYFIKEKTRLIVNAWAIGRDPNVWSENAKEFYPERFVEKKMNYLGQEFESIPFGSGRRRCPGIQLGLITVKLVIAQFIHCFNWELPHNISPSNLNMEEKFGLTIPRAQHLHAIPSYRLNDAKLE* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2396 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Mtr5g2396 510 SUPERFAMILY Cytochrome P450 38 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 Coils Coil 329 349 - -
Mtr5g2396 510 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 Pfam Cytochrome P450 38 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 Gene3D Cytochrome P450 26 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2396 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 504 - -
Mtr5g2396 510 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2396 Mtr-Chr5 31356128 31358942 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2396 5 504 Cytochrome P450 AT5G07990 39.882 9.64e-128 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2396 - - mtr:MTR_5g470730 745.732