Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2394 ATGTCTTTTGCAGCAACAACTATGCTCTATTTCCTTCTCTTCACTTTCATATACCTTTTATTCAAACTCTTCTTACATCCAAAACAAAATACCATTAACCATAAAAAGCCACCAGGTCCACCAACACTACCAATAATAGGAAACCTTCACATGTTAGGTAAACTTCCACATAGAACACTTCAATCACTCTCCAAAAGATATGGTCCAATCATGTCCTTACAACTTGGTCAAGTTCCAACAATTGTTATTTCATCTTCAAAAGGAGCAGAATCATTCCTCAAAACCCATGACATCGTTTTCGCAAGCCGACCGAAGATTCAAGGATCAGAGCTCATGTCCTATGGTTCTAAAGGGTTGCCTTTTTCTGAGTATGGTCCTTATTGGCGCAGTATGAGGAAATTTTGCACTTTGAAACTTCTTAGTGCTTCAAAAGTTGAGAAGTCGGGTCCTATTAGAAAAGAGGAGTTGGGTGTTTTGGTTAACACTTTGAAGAAAGCTTCTTTGGTAGGTGAGGTTGTGAATGTTAGTGAGATTGTCGAGAATCTTATTGAGGATATTGTGTATAAGATGATATTGGGTAGAGGTAAGTATGAGCAATTTGACTTGAAGAAGATGATTAAAGATGGATTAACTTTGATGGGAGCTTTTAATCTGGCTGATTATGTTCCTTGGCTAGGCATTTTTGACCTTCAGGGATTAACACAAGCTTGCAAAAAAACCAGTAAAGCTCTTGATGAAGTTTTGGAGATGATAATAACAGAGCATGAACAAACTACTAATACAGACGATCCTAAAGATTTTGTAGACACAGTTCTTTCAATTATGCACCAAACCATTGATGTTGAGGGTGGACAAGATCTCGTCATTGATCGAACGATCATCAAGGCTATTTTGCTCGACATGATAGGGGCATCAATTGATACATCTTCAAACGTGATAGAGTGGGCTTTATCTGAACTTTTAAGGCATCCAAGAGTGATGAAAATTCTTCAAGATGAAATACAAAATGAAGTAGGAAATAAGAGAATGGTTGAAGAAAAGGATTTGAAGAATTTTAATTACCTAGATATGGTGGTTGATGAAACCTTAAGACTTTATCCTGTTGCACCTTTATTAATCCCTCGTGAATGTAGAGAGAACATAACAATTGATGATTATTCTATAAAAGAAAAGACACGAGTTATAGTAAATGCATGGGCAATTGGGAGAGATCCTGATGTTTGGTCAGAAAATGCTGAAGAATTTTACCCAGAGAGATTTATTGAGAAAAAAATGAATTATCTCGGACAAGAGTTTGAATCTATACCATTTGGTTCTGGTCGTAGACGTTGTCCTGGAATTCAATTGGGTATGATTACGGTTAAGTTGGTTATAGCTCAATTCGTGCATTGCTTTAACTGGGAACTTCCACATAATATTAGTCCTTCCAATTTGAATATGGAGGAGAAATTTGGACTCACTATACCAAGAGCTCAGCATTTGCACGCAATACCAAGTTATCGTTTGGATGATGCTAAGCTTGAATAG 1527 0.368 MSFAATTMLYFLLFTFIYLLFKLFLHPKQNTINHKKPPGPPTLPIIGNLHMLGKLPHRTLQSLSKRYGPIMSLQLGQVPTIVISSSKGAESFLKTHDIVFASRPKIQGSELMSYGSKGLPFSEYGPYWRSMRKFCTLKLLSASKVEKSGPIRKEELGVLVNTLKKASLVGEVVNVSEIVENLIEDIVYKMILGRGKYEQFDLKKMIKDGLTLMGAFNLADYVPWLGIFDLQGLTQACKKTSKALDEVLEMIITEHEQTTNTDDPKDFVDTVLSIMHQTIDVEGGQDLVIDRTIIKAILLDMIGASIDTSSNVIEWALSELLRHPRVMKILQDEIQNEVGNKRMVEEKDLKNFNYLDMVVDETLRLYPVAPLLIPRECRENITIDDYSIKEKTRVIVNAWAIGRDPDVWSENAEEFYPERFIEKKMNYLGQEFESIPFGSGRRRCPGIQLGMITVKLVIAQFVHCFNWELPHNISPSNLNMEEKFGLTIPRAQHLHAIPSYRLDDAKLE* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2394 508 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 502 - -
Mtr5g2394 508 Coils Coil 327 347 - -
Mtr5g2394 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 502 - -
Mtr5g2394 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Mtr5g2394 508 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2394 508 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2394 508 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2394 508 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2394 508 Pfam Cytochrome P450 37 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2394 508 Gene3D Cytochrome P450 25 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2394 508 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2394 508 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2394 508 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2394 508 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2394 508 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2394 508 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2394 508 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2394 508 SUPERFAMILY Cytochrome P450 37 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2394 Mtr-Chr5 31289235 31292163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2394 7 499 Cytochrome P450 AT3G48320 39.798 8.83e-125 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2394 - - mtr:MTR_5g470730 679.863