Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2393 ATGTCTTTTGCACTAACAACAACAATGTTTGCTTTTCTTCTCTTCACTTTCATGTACTTTCTATTCAAACTCTACTTACATCCAAAACAAAAAACCCTAAACCATAAAAAACCACCAGGTCCATCAACACTACCAATAATTGGAAATCTTCACATATTAGGCAAACTTCCACATAGAACACTTCAATCACTCTCCAAAAAATATGGTCCAATCATGTCCTTACAACTTGGTCAAGTTCCAACTATTATCATTTCATCTTCAAAAGCTGCAGAATCATTCCTCAAAACTCATGACATCGTTTTTGCAAGTCGACCAAAGGTTCAAGGATCAGATCTCATGTCTTATGGTTCCAAAGGGATGGCTTTTTCTGAGTATGGTCCTTATTGGCGTAGTGTGAGGAAATTTTGCACTTTGAAACTTTTTAGTGCTTCAAAAGTTGAGATGTTTGGTCCTATTAGGAAGGAGAAGTTGGATGTTTTGGTTATATCTTTGGAGAAAGCTGCCTTGGAGGGTGAGGTTGTGAATGTTAGTGAGGTTGTAGAGAATCTTATTGAGGATATTGTGTATAAGATGATGTTTGGTCGGAGTAAGTATGAGCAATTTGACATGAATAAGTTAGTTCTAGAAGCAATGGCTTTGATGGGAGCTTTTAATCTGGCTGATTATGTACCTTGGCTAGGCGTTTTTGACCTTCAGGGATTAACACGAGCTTGCAAAAAAACCAGTAAAGCCCTCGATGAGGTTTTGGAGATGATAATAACAGAGCACGAACAGACTACTAATACTGACAAAACTCGTAATGAAGACTTTGTAGACATACTTCTTTCAATTATGCACCAAACCATTGATGTCGAGGGTGAACAAAATCTCGTCATTGATCGAACTAACATCAAGGCTATTTTGCTCGACATGATAGCGGCATCAGTTCATACATCTGCTACCACGATTGAGTGGGCTTTATCTGAACTTCTAAGGCATTCAAGAGTGATGAAAATTCTTCAAGATGAGATACAAAATGAAGTAGGAAATAAAAGAATGGTTGAAGAGAAGGATCTGAAGAAGTTTAATTACTTAGATATGGTTGTTGATGAAACCTTAAGACTTTATCCTGTTGGACCCTTATTAATCCCTCGTGAATGTAGAGAGAGCATAACAATTGATGGATATTTTATAACGAAAAAGACTCGAGTTATAGTAAATGCATGGGCTATTGGGAGAGATTGTAACGTTTGGTCAGAAAATGCTGATGAATTTTACCCAGAGAGATTTATTGACAAGAAAATGAATTATCAAGGACATGAGTTTGAATCTATACCATTTGGTTCTGGTCGTAGGCGTTGTCCTGGAATTCAATTGGGTTTAATTATCGTTAAGTTGGTTATAGCTCAATTTGTGCATTGCTTTAACTGGGAACTTCCACATAATATTAGTCCTTCCAATTTGAATATGGAGGAGAAATTTGGACTCTCTATACCAAGAGCTCAGCATTTGCAGGCAATACCGAGTTATCGTTTGGATGATGCTAAGCATGAATAG 1536 0.3704 MSFALTTTMFAFLLFTFMYFLFKLYLHPKQKTLNHKKPPGPSTLPIIGNLHILGKLPHRTLQSLSKKYGPIMSLQLGQVPTIIISSSKAAESFLKTHDIVFASRPKVQGSDLMSYGSKGMAFSEYGPYWRSVRKFCTLKLFSASKVEMFGPIRKEKLDVLVISLEKAALEGEVVNVSEVVENLIEDIVYKMMFGRSKYEQFDMNKLVLEAMALMGAFNLADYVPWLGVFDLQGLTRACKKTSKALDEVLEMIITEHEQTTNTDKTRNEDFVDILLSIMHQTIDVEGEQNLVIDRTNIKAILLDMIAASVHTSATTIEWALSELLRHSRVMKILQDEIQNEVGNKRMVEEKDLKKFNYLDMVVDETLRLYPVGPLLIPRECRESITIDGYFITKKTRVIVNAWAIGRDCNVWSENADEFYPERFIDKKMNYQGHEFESIPFGSGRRRCPGIQLGLIIVKLVIAQFVHCFNWELPHNISPSNLNMEEKFGLSIPRAQHLQAIPSYRLDDAKHE* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2393 511 SUPERFAMILY Cytochrome P450 38 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 Gene3D Cytochrome P450 24 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 505 - -
Mtr5g2393 511 Coils Coil 166 186 - -
Mtr5g2393 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 505 - -
Mtr5g2393 511 Coils Coil 330 350 - -
Mtr5g2393 511 Pfam Cytochrome P450 38 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2393 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2393 Mtr-Chr5 31283099 31285687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2393 34 506 Cytochrome P450 AT3G26330 39.212 1.71e-123 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2393 - - mtr:MTR_5g470730 664.455