Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2392 ATGTTTTCAACAACAATAATAATTCCTTTCATTCTCTTCACTTTCACATACCTTTTATTCAAATTCTACTTACGTGAAAAACAAAACACCATAAATCATAAAAAACCACCAGGTCCACCAACACTACCAATAATAGGAAACCTTCACATGTTAGGTAAACTTCCACATAGAACACTTCAATCACTGTCCAAAAAATATGGTTCAATCATGTCCTTACAACTTGGTCAAGTTCCAACAATTGTTATTTCATCTTCAAAAGCTGCAGAATCATTCCTCAAAACTCATGACATCAATTTTGCAAGTCGGCCAAAGACTCAAGCATCTCAGCTCATTTTTTATGGTTCCAAAGGGTTGGCTTTTTCTGAGTATGGTCCTTATTGGCGTAGTGTAAAGAAACTTTGCACTTTGAAACTTCTTAGTGCTTCAAAAGTTGAGATGTTTGGTCCTATTAGGAAGAAGGAGTTGGATGTTTTGGTTAAGTCATTAGAGAAAGTTGTTTTGGTAGGTGAGGTTGTGAATGTTAGTGAGATTGTAGAGAATCTTATTGAAGATATTGTGTATAAGATGATATTGGGTAGGGGTAAGTATGAGCAATTTGATTTAAAGAAGTTGGTTCAAGAAGGAATGGCTATGCTTGGAGCTTTTAATCTGGCTGATTATGTTTCTTGGTTAGGTCCTTTTGATCTTCAGGGATTTACACGAACCTGCAAGAAAACCGGTAAAGCACTTGATGAGGTATTGGAGATGATAATTACAGAGCATGAACAAAGCACTAATGTAGACAAAGTTCGTCATGAAGATTTCATTGATATACTTCTCTCAATTGTGCACCAAACGGTAGATCCAGAAAATGAACAAAGTGGTGTTATTGACAGAACTAACATCAAGGCAATTTTACTAGACATGATTGTGGCAGGAATTGATACAGCCACTACCACGATTGAGTGGGCTTTATCTGAACTTTTCAGACATCCAAGAGTGATGAAAAAGCTTCAAGATGAGATACAAAATGAAGTAGGAAATAAAAGAATGGTCGAAGAGAATGATTTGAAGAAGTTGAATTACTTAGATATGGTGGTTGATGAGACATTAAGACTTTACCCTGTTGGACCCTTATTACTTCCTCGTGAATGTAGAGAAAGCATAACAATTGATGGATATTTTATAAAGGAAAAGACACGAGTTATAGTAAATGCATGGGCTATAGGGAGAGATTCAAATATTTGGTTAGAAAACGCTGATGAGTTTTATCCAGAGAGATTTAGTGATAAGAAAATGAATTATCAAGGACAGCAATTTGAATCTATACCATTTGGTTCAGGTCGTAGACGTTGTCCTGGGATTCAATTGGGTTTGGTTACGGTTAGATTTGTTGTAGCTCAATTGGTGCATTGCTTTAATTGGGAACTTCCACATAATATTAGCCCTTCCAATTTGAATATGGAAGAGAAATTTGGAGTCACTATACCAAGGGCTCAACATTTGCACGCAATACCGAGTTATCGTTTGGAATGTGATGAGAAGCTTGAATAG 1533 0.3607 MFSTTIIIPFILFTFTYLLFKFYLREKQNTINHKKPPGPPTLPIIGNLHMLGKLPHRTLQSLSKKYGSIMSLQLGQVPTIVISSSKAAESFLKTHDINFASRPKTQASQLIFYGSKGLAFSEYGPYWRSVKKLCTLKLLSASKVEMFGPIRKKELDVLVKSLEKVVLVGEVVNVSEIVENLIEDIVYKMILGRGKYEQFDLKKLVQEGMAMLGAFNLADYVSWLGPFDLQGFTRTCKKTGKALDEVLEMIITEHEQSTNVDKVRHEDFIDILLSIVHQTVDPENEQSGVIDRTNIKAILLDMIVAGIDTATTTIEWALSELFRHPRVMKKLQDEIQNEVGNKRMVEENDLKKLNYLDMVVDETLRLYPVGPLLLPRECRESITIDGYFIKEKTRVIVNAWAIGRDSNIWLENADEFYPERFSDKKMNYQGQQFESIPFGSGRRRCPGIQLGLVTVRFVVAQLVHCFNWELPHNISPSNLNMEEKFGVTIPRAQHLHAIPSYRLECDEKLE* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2392 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 504 - -
Mtr5g2392 510 Gene3D Cytochrome P450 22 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2392 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Mtr5g2392 510 Pfam Cytochrome P450 36 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2392 510 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2392 510 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2392 510 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2392 510 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2392 510 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2392 510 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2392 510 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2392 510 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2392 510 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2392 510 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2392 510 Coils Coil 328 348 - -
Mtr5g2392 510 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 504 - -
Mtr5g2392 510 SUPERFAMILY Cytochrome P450 36 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2392 Mtr-Chr5 31278965 31282090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2392 26 500 Cytochrome P450 AT3G48310 38.866 2.97e-123 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2392 - - mtr:MTR_5g470730 635.18