Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2390 ATGTCTTCTGCAGCAATAACAACAGTACTTGCTTTCCTTATCTTCACTTTCACATATTTTTTATCCAAACTATTCTTGCATCCAAAACAAAAAACCATCAATCATAAAAAGCCACCAGGTCCACCATCACTACCAATAATCGGAAACCTCCACATATTAGGCACCCTTCCACATAGAACACTTCAATCACTCTCCAAACAATATGGTCCAATCATGTCCTTACAACTAGGTCAAGTCCCAGCTATTGTCATTTCATCTTCAAAAGCCGCAGAGTCATTCGTCAAAACCCATGACATCGTTTTCGCAAACCGACCGGAACTTGTAGGAGCACAGATCATGTCTTATGGTTGCAAAGGGTTGGCGTTTTCTAAGTACGACTCTTATTGGCGTAGTGTGAGAAAACTTTGTACTTCAAAACTTCTTAGTGCTTCGAAAGTTGAGATGTTTGGTCCTATTAGGAAGGAGAAGTTGGATGTTTTGGTTAAATCTTTGGAGAAAGCTGCTCTGGAGGGTGAGGTTGTGAATGTTAGTGAGGCTGTAGAGAATGTTATAGAGGATATTGTGTATAAGATGGTGTTGGGTCGGAGTAAGTATGATCATATTGACCTAAAGAGGTTGGTTCAAGACGTAATGGCTTTGATTGGAGCTTTTAATATGGCTGATTATGTTCCTTGGTTAGGCACATTTGATCTTCAGGGCTTAACACGAGCCTGCAAAAGAACCAACAAAGCACTTGATGAGGTGTTGGAGATGATAATATCAGAGCATGAACAAACCACTAATACAGACAAAACTCGTCATGAAGACTTTGTAGACATACTTCTCACTTTTAAGCACCAAAACATTGATCATGGGAGTGAACAAAATCATGTCATTGATCGAACTAACATCAAAGCTATTTTACTAGACATGGTTGTGGCATCATTTAGTACATCTGCTACCACAATTGAGTGGGCTTTATCCGAACTTTTAAGGCATCCAAGAGTGATGAAAAATCTTCAAGATGAAATACAAAATGAAGTAGGAAATAAGAGAATGGTTGAAGAAAAGGATTTGAAGAATTTTAATTACTTAGATATGGTGGTTGATGAAACTTTAAGACTTCATCCAGTTTCACCCTTCTTACTCCCTCGTGAATGTAGAGAGAACATAACAATTGATGGTTATTTTGTAAAGGAAAAGACACGAGTTATAGTAAATGCATTTACAATAGCGAGAGATCCTAATGTTTGGTCAGAAAATGCTGAAGAATTTTGTCCAGAGAGGTTTATTAATAAGAAATTGAATTATGAAGGACAAGAGTTTGAAAGTATACCATTTGGATTTGGTCGTAGGCGTTGCCCTGGAATTCAATTGGCTTTGAGGACTGTTAGGTTAAGCATAGCTCAATTGGTGCATTGCTTTAATTGGAAACTTCCATATAATATTAGTCCTTCTAATTTGAACATGGATGAGAAATTTGGACAATCTATACATAGAGCTCAACACTTACACGCAATACCAAGTTATCGTTTGGCAGGTGATGGCAAGCTTGAATAG 1539 0.3769 MSSAAITTVLAFLIFTFTYFLSKLFLHPKQKTINHKKPPGPPSLPIIGNLHILGTLPHRTLQSLSKQYGPIMSLQLGQVPAIVISSSKAAESFVKTHDIVFANRPELVGAQIMSYGCKGLAFSKYDSYWRSVRKLCTSKLLSASKVEMFGPIRKEKLDVLVKSLEKAALEGEVVNVSEAVENVIEDIVYKMVLGRSKYDHIDLKRLVQDVMALIGAFNMADYVPWLGTFDLQGLTRACKRTNKALDEVLEMIISEHEQTTNTDKTRHEDFVDILLTFKHQNIDHGSEQNHVIDRTNIKAILLDMVVASFSTSATTIEWALSELLRHPRVMKNLQDEIQNEVGNKRMVEEKDLKNFNYLDMVVDETLRLHPVSPFLLPRECRENITIDGYFVKEKTRVIVNAFTIARDPNVWSENAEEFCPERFINKKLNYEGQEFESIPFGFGRRRCPGIQLALRTVRLSIAQLVHCFNWKLPYNISPSNLNMDEKFGQSIHRAQHLHAIPSYRLAGDGKLE* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2390 512 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 Gene3D Cytochrome P450 25 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 Pfam Cytochrome P450 38 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 SUPERFAMILY Cytochrome P450 38 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g2390 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 506 - -
Mtr5g2390 512 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 506 - -
Mtr5g2390 512 Coils Coil 330 350 - -
Mtr5g2390 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2390 Mtr-Chr5 31258730 31261852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2390 34 501 Cytochrome P450 AT3G26330 37.975 3.56e-124 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2390 - - mtr:MTR_5g470730 664.07