Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2382 ATGGCTAACGCTTTGCTCGGAGTTGTGTTTGAAAATTTGATGTCTCTCCTTCAAAATGAATTTTCTACCATTTCTGGTATCAAGTCAAAGGCTGAAAAACTATCAACCACCTTAGATTTGATCAAGGCTGTTCTTGAAGATGCTGAAAAGAAACAAGTCACAGACCGCTCTATTAAGGTATGGCTACAACAACTCAAAGATGTTGTTTATGTGCTCGATGATATCCTTGATGAGTGCTCGATCAAGTCTGGTCAACTTAGAGGATCAATCTCTTTTAAACCAAATAACATCATGTTTCGCCTTGAGATCGGCAACAGGTTGAAAGAGATTACAAGGAGATTGGATGATATTGCTGATAGTAAGAACAAGTTTTTTCTACGGGAGGGTACTATTGTTAAGGAAAGCTCAAATGAAGTAGCTGAATGGCGTCAAACCAGCTCCATTATTGTTGAACCAAAAGTATTTGGACGAGAAGATGATAAAGAAAAGATTGTTGAGTTTCTTCTCACCCAAGCGAGGGACTCTGACTTCCTTTCCGTCTATCCCATTGTTGGTTTAGGTGGTATTGGAAAAACAACTCTCGTTCAATTGGTCTACAATGATGTTAGGGTGAGTGGCAATTTTGACAAAAATATTTGGGTTTGTGTTTCTGAGACTTTCTCTGTCAAGAGGATTTGTTGTTCCATTATAGAATCTATCACAAGAGAGAAGTGTGCTGACTTCGAATTAGATGTAATGGAAAGAAAGGTGCAAGAAGTGCTGCAAGGTAAAAAATATTTGCTCGTTTTGGATGATCTGTGGAACAAAACCCAACAATTGGAATCTGGACTAACACATGATAAGTGGAATCATTTGAAGTCTGTGTTGTCGTGTGGATCAAAAGGTAGTTCCATTTTAGTGTCCACCCGTGATAAAGTTGTTGCAACAATCGTGGGAACATGCCAAGCTCACTCTTTGTCTGGTATCTCTGATAGTGAATGTTGGTTGTTGTTCAAAGAATATGCATTTGGATATTACAGAGAAGAGCATACAAAGCTTATGGAAATAGGAAAGGAGATTGTAAAGAAATGTAATGGATTGCCTCTTGCAGCAAAAGCATTGGGAGGTTTGATGAGCTCAAGGAATGAAGAAAAGGAATGGCTTGATATTAAGGACAGTGAGCTTTGGGCTTTATCGCAAGAAAATTCTATTTTGCTTGCTTTGAGGTTGAGTTACTTTTATTTAACACCAACCCTAAAGCAATGTTTCTCTTTTTGCGCTATATTTCCCAAGGATAGAAAAATCCTGAAAGAAGAATTGATTCAACTTTGGATGGCTAATGAATTTATTTCATCTATGGGTAATTTGGACGTTGAAGATGTTGGAAACATGGTTTGGAAGGAATTGTACCAAAAATCATTCTTTCAAGATGGCAAGATGGATGAATATTCTGGAGACATTTCTTTCAAGATGCATGATCTTGTCCATGATCTCGCTCAATCAATAATGGGGCAAGAATGTATGCATTTGGAGAACAAAAACATGACCAGTTTGTCAAAAAGCACACACCACATTGTTGTTGACTACAAAGTGTTATCCTTTGATGAAAATGCTTTCAAAAAAGTTGAATCCTTGAGAACATTGTTGAGTTATTCTTACCAAAAAAAACATGATAACTTCCCAGCATATCTTTCTCTCCGGGTTTTATGCGCATCCTTTATCCGGATGCCATCACTGGGGAGTTTAATTCATTTAAGGTATTTGGGACTTCGTTTTCTTGACATAAAAAAGTTGCCTGACTCAATTTACAATCTAAAAAAGCTGGAAATCTTGAAAATAAAATACTGTGATAAACTTAGCTGGCTTCCGAAACGCTTGGCTTGTTTACAAAATCTTAGACATATAGTCATTGAAGAATGTCGATCTTTGTCTAGTATGTTTCCTAACATTGGAAAATTAACTTGTTTAAGAACATTAAGTGTGTACATTGTTAGTTTAGAGAAAGGGAATAGTTTGACAGAGTTACGTGATCTAAAACTCGGTGGAAAACTGAGTATCGAAGGATTAAACAATGTTGGCAGTTTATCTGAAGCTGAAGCGGCTAATTTGATGGGTAAAAAAGACCTTCATCAATTATGCTTGTCATGGATATCGCAACAGGAATCTATAATTAGTGCTGAGCAAGTACTCGAAGAGCTTCAACCTCACTCAAATCTCAAATGCTTGACAATAAATTACTATGAAGGATTATCGTTACCAAGTTGGATAATTATTCTTAGTAATTTAATTTCTCTTAAACTTGAGGATTGCAACAAGATTGTGCGGCTTCCGTTACTTGGTAAACTACCATCTCTAAAAAAACTGGAATTATCTTATATGGATAATCTGAAATACTTGGATGATGATGAATCTCAGGATGGTATGGAGGTGAGGATTTTCCCATCTCTGGAGGAACTCGTATTATATAAGTTACCAAACATAGAGGGTTTATTGAAAGTTGAAAGAGGGGAGATGTTTCCTTGTCTTTCTAGTTTGGATATTTGGAAATGCCCTAAAATTGGACTGCCATGTCTTCCATCTCTTAAAGACCTCGTTGCCGATCCATGTAACAATGAGTTACTGAGGTCAATCTCTACCTTTTGTGGTCTTACTCAGCTTGCCCTAAGTGACGGTGAAGGAATAACATCCTTCCCAGAGGGGATGTTCAAAAACCTTACTTCTCTTCTATCTCTGTTTGTATATTGTTTCTCTCAATTGGAGTCCTTACCAGAGCAAAATTGGGAAGGTCTTCAATCCCTTCGAATTTTAAGGATTTGGAATTGTGAAGGATTGCGATGCTTGCCGGAGGGTATTCGACACCTCACTTCACTTGAGCTTCTGGCAATTGAGGGTTGCCCAACATTAGAGGAACGATGCAAAGAGGGAACAGGGGAGGATTGGGACAAGATAGCTCATATTCCAATAATACAGTTTACCGAGGATTAA 2964 0.3758 MANALLGVVFENLMSLLQNEFSTISGIKSKAEKLSTTLDLIKAVLEDAEKKQVTDRSIKVWLQQLKDVVYVLDDILDECSIKSGQLRGSISFKPNNIMFRLEIGNRLKEITRRLDDIADSKNKFFLREGTIVKESSNEVAEWRQTSSIIVEPKVFGREDDKEKIVEFLLTQARDSDFLSVYPIVGLGGIGKTTLVQLVYNDVRVSGNFDKNIWVCVSETFSVKRICCSIIESITREKCADFELDVMERKVQEVLQGKKYLLVLDDLWNKTQQLESGLTHDKWNHLKSVLSCGSKGSSILVSTRDKVVATIVGTCQAHSLSGISDSECWLLFKEYAFGYYREEHTKLMEIGKEIVKKCNGLPLAAKALGGLMSSRNEEKEWLDIKDSELWALSQENSILLALRLSYFYLTPTLKQCFSFCAIFPKDRKILKEELIQLWMANEFISSMGNLDVEDVGNMVWKELYQKSFFQDGKMDEYSGDISFKMHDLVHDLAQSIMGQECMHLENKNMTSLSKSTHHIVVDYKVLSFDENAFKKVESLRTLLSYSYQKKHDNFPAYLSLRVLCASFIRMPSLGSLIHLRYLGLRFLDIKKLPDSIYNLKKLEILKIKYCDKLSWLPKRLACLQNLRHIVIEECRSLSSMFPNIGKLTCLRTLSVYIVSLEKGNSLTELRDLKLGGKLSIEGLNNVGSLSEAEAANLMGKKDLHQLCLSWISQQESIISAEQVLEELQPHSNLKCLTINYYEGLSLPSWIIILSNLISLKLEDCNKIVRLPLLGKLPSLKKLELSYMDNLKYLDDDESQDGMEVRIFPSLEELVLYKLPNIEGLLKVERGEMFPCLSSLDIWKCPKIGLPCLPSLKDLVADPCNNELLRSISTFCGLTQLALSDGEGITSFPEGMFKNLTSLLSLFVYCFSQLESLPEQNWEGLQSLRILRIWNCEGLRCLPEGIRHLTSLELLAIEGCPTLEERCKEGTGEDWDKIAHIPIIQFTED* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2382 987 Pfam NB-ARC domain 157 385 IPR002182 GO:0043531
Mtr5g2382 987 Gene3D - 136 316 IPR027417 -
Mtr5g2382 987 CDD RX-CC_like 11 119 IPR038005 -
Mtr5g2382 987 PRINTS Disease resistance protein signature 180 195 - -
Mtr5g2382 987 PRINTS Disease resistance protein signature 253 267 - -
Mtr5g2382 987 PRINTS Disease resistance protein signature 357 371 - -
Mtr5g2382 987 PRINTS Disease resistance protein signature 773 789 - -
Mtr5g2382 987 PANTHER OS05G0414200 PROTEIN 28 960 - -
Mtr5g2382 987 Gene3D Ribonuclease Inhibitor 522 854 IPR032675 -
Mtr5g2382 987 Gene3D - 405 495 IPR036388 -
Mtr5g2382 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 419 IPR027417 -
Mtr5g2382 987 Gene3D Ribonuclease Inhibitor 855 968 IPR032675 -
Mtr5g2382 987 Pfam Rx N-terminal domain 6 92 IPR041118 -
Mtr5g2382 987 Coils Coil 31 51 - -
Mtr5g2382 987 PANTHER DISEASE RESISTANCE PROTEIN RP 28 960 IPR044974 GO:0006952
Mtr5g2382 987 SUPERFAMILY L domain-like 807 980 - -
Mtr5g2382 987 Gene3D - 322 404 IPR042197 -
Mtr5g2382 987 Gene3D - 6 119 - -
Mtr5g2382 987 SUPERFAMILY L domain-like 483 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2382 Mtr-Chr5 31164613 31190278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2382 183 784 WRKY Transcription Factor Family AT5G45050 23.323 4.34e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2382 - - mtr:MTR_5g071670 1498.41