Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2376 ATGAGTTTCTTTTCAGAATCTACATCACGACCATTTAGAACCATGAATGAAGATTTGGAGAACAATAATGTAGAGACAGTACAACATAACATTTCATCAAATTCTATTGTGAGAAAGAAGTCAGATATGGTTTTGGTGACAAATAATGTTCGGTTTCAAATACTAAGAAATGTGATGACAAATATGAAAGAGGTGATGTTGGGTACTAAGCTTGTTGTGCTTTTTCCTGCTGTTCCTTTAGCTGTTGCTGCTGATTTTTATAGCCTTGGAAGGCCTTGGATTTTTGCTTTGAGCCTACTTGGACTTGCTCCCCTAGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCATATTTCACCGGCCCAACAGTTGGAGGGCTTCTAAATGCAACTTGTGGAAATGCAACTGAGATGATCATAGCAATATTAGCACTTCATCAGAACAAAATACATGTTGTCAAGTTCTCCTTGCTTGGTTCAATTCTCTCAAACCTTCTCTTGGTTCTAGGCAGCTCACTCCTTTGTGGTGGCTTAGCAAACCTTAAGAGGGAGCAAAGATATGACAGAAAACAAGCTGATGTAAATTCATTGCTTCTGTTGCTGGGATTGCTATGCCATTTGCTGCCATTGATGTTCAAGTATGCATTGGCTGGGGGAAATCATTCTATTGCCAATTCTACTCTTCAATTGTCAAGAGCTAGCAGTGTTGTTATGCTTCTAGCATATGTTTCATATATCTTCTTCCAATTGAAAACTCATCGAAAAATATTTGATGCACAAGAGGTAGATGATGAAGATGATGAAAAAGCAGTGATAGGATTTTGGAGTGCATTTAGTTGGTTGGTGGGTATGACATTGGTCATATCTGTGCTTTCTGAGTATGTTGTGGGAACCATTGAGGCTGCTTCAGATTCTTGGGGTATTTCTGTTAGCTTCATTAGCATAATTTTGCTACCAATTGTTGGGAATGCTGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAACTGGACATATCTTTAGGTGTTGCTATGGGATCTGCTACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGTATACGAATGGATTTGGACTTCAATCTTCTTGAAACTGGATGTCTTGGTTTTGCAATTATTGTTACAGCCTTCACTTTACAGGATGGAACTTCACACTATTTGAAAGGAGTGATTCTTACTCTATGTTACATTGTCATTTCTGCATGTTTTTTCGTTCTCAAAACTCCACAAATCAATCATTATGGTATCGCCATGCTTTGA 1308 0.383 MSFFSESTSRPFRTMNEDLENNNVETVQHNISSNSIVRKKSDMVLVTNNVRFQILRNVMTNMKEVMLGTKLVVLFPAVPLAVAADFYSLGRPWIFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIAILALHQNKIHVVKFSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLMFKYALAGGNHSIANSTLQLSRASSVVMLLAYVSYIFFQLKTHRKIFDAQEVDDEDDEKAVIGFWSAFSWLVGMTLVISVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIRMDLDFNLLETGCLGFAIIVTAFTLQDGTSHYLKGVILTLCYIVISACFFVLKTPQINHYGIAML* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2376 435 Pfam Sodium/calcium exchanger protein 277 417 IPR004837 GO:0016021|GO:0055085
Mtr5g2376 435 Pfam Sodium/calcium exchanger protein 93 250 IPR004837 GO:0016021|GO:0055085
Mtr5g2376 435 TIGRFAM cax: calcium/proton exchanger 76 420 IPR004798 GO:0006816|GO:0015369
Mtr5g2376 435 PANTHER VACUOLAR CATION/PROTON EXCHANGER 16 429 - -
Mtr5g2376 435 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 16 429 IPR004713 GO:0006812|GO:0008324|GO:0016021
Mtr5g2376 435 Gene3D - 122 265 IPR044880 -
Mtr5g2376 435 Gene3D - 268 420 IPR044880 -
Mtr5g2376 435 TIGRFAM caca2: calcium/proton exchanger 57 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2376 Mtr-Chr5 31098537 31104077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2376 29 426 Antiporters AT2G38170 67.241 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2376 K07300 - gmx:100816844 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2376 5 31098537 31104077 Mtr5g2376 5 31098537 31104077 ECH