Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2326 ATGGGAAACACAGAGAGAATTGAAAGTATGAAGGAATGGTTCAAATCATCACAAGCACTTCTTAGTATGTTATTAGTGCAAATATTTGCAACTGGGATGCAACTTCTATCAAGAGTCATTTTGGTTCAAGGGACTTACATTTTTGCACTCATTGCTTATCGACATATTGTTGCTGCTATTTGTGTTGCTCCTTTTGCACTCTATTTTGAAAGAGGACAGGCGAAGAAGTTCAATTGGAGAGTTTGGTTCTGGCTTTTCCTTAACGGATTCGTGGGGATGACAATGGCTCTAGGGTTATTCTATTACGGTCTTCGAGACACAACTGCTACTTATTCCGTCAACTTTCTCAACTTGGTTCCTATATTGACATTCTTAACTTCTATCATATGCAGAATGGAGAATTTGAAGATTGGAACATGGGGTGGTAGAGCCAAGTGTATAGGAGCTATTATGTGTGTTGGTGGAGCATTAGCAACGAGTCTTTACAAAGGGAAGGAATTTTATATTGGTCATCATCATCATCATCATCATCATAGTCACCATTCTGCTGAGATTAGTGCTGTTGCAGCACACAAAACTCACATGTTTCGTGGCACTTTCTTTTTGGTTGGAGCATGCTGTTCTTACACTGCTTGGTTTATTCTTCAAGTAAAATTGGTGAAAGTATTTCCATTGAGGTATTGGGGAATAATGCTATCATGTGTTATGGCCGCAATTCAATCAGCAACAATAGGCGCATGCCTAAATCAAAGTAAAGAAGCTTGGAGATTAGACTGGAATCTACAGCTGATTACTATACTATACTCGGGAGCATTGGCTACAGCTGCTACATTTTGTTTACTAACATGGGCAATTAAAATTAAGGGACCTACTTTCCCTCCAATGTTCAATCCATTGGCTCTTGTTTTCGTTGCCATATCTGACACTATCATACTTGGTGAACCACTCAAAGTTGGAACGTTGTTAGGCATGGTTTTGATTATAATAGGATTGTACTATTTTTTGTGGGGTAAAAGGAATGAAATGCCACGTTTGCCTCAAACAAGTGTTGCAGCAGCAGAATTATCAACAAGCATGGATGATCAGCCTATTGTGTCTCAATCAAAAGCTGTCGTAGTACCAACTTCTTCACCAAATGAGAGTGTACATCTTGATGTTGATAAATCTGATAAAAACTGA 1179 0.3876 MGNTERIESMKEWFKSSQALLSMLLVQIFATGMQLLSRVILVQGTYIFALIAYRHIVAAICVAPFALYFERGQAKKFNWRVWFWLFLNGFVGMTMALGLFYYGLRDTTATYSVNFLNLVPILTFLTSIICRMENLKIGTWGGRAKCIGAIMCVGGALATSLYKGKEFYIGHHHHHHHHSHHSAEISAVAAHKTHMFRGTFFLVGACCSYTAWFILQVKLVKVFPLRYWGIMLSCVMAAIQSATIGACLNQSKEAWRLDWNLQLITILYSGALATAATFCLLTWAIKIKGPTFPPMFNPLALVFVAISDTIILGEPLKVGTLLGMVLIIIGLYYFLWGKRNEMPRLPQTSVAAAELSTSMDDQPIVSQSKAVVVPTSSPNESVHLDVDKSDKN* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2326 392 Pfam EamA-like transporter family 20 151 IPR000620 GO:0016020|GO:0016021
Mtr5g2326 392 Pfam EamA-like transporter family 197 335 IPR000620 GO:0016020|GO:0016021
Mtr5g2326 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 339 - -
Mtr5g2326 392 MobiDBLite consensus disorder prediction 370 392 - -
Mtr5g2326 392 Gene3D - 231 336 - -
Mtr5g2326 392 PANTHER WAT1-RELATED PROTEIN 17 360 - -
Mtr5g2326 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 153 - -
Mtr5g2326 392 PANTHER WAT1-RELATED PROTEIN 17 360 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2326 Mtr-Chr5 30538692 30546041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2326 21 338 Nodulin-like Gene Family AT1G09380 36.164 5.02e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2326 - - gmx:100782551 511.916