Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2325 ATGGGTGCCGTCGTTGAGTGTTTACCGTCGCCGCAACAAGCGGAGGAGCTGGCGGTTCTTTCACTGAACAAGCTGCCGTTAGGGTTCCGGTTCCGGCCTACTGATGAGGAGCTTGTTGATTTTTATCTGAGGATGAAGATCAATGGAAACGGTGATGAAGTTTGGGTTATTCGTGAAGTTGATGTTTGTAAATTTGAGCCTTGGGATTTGCCTGATTTATCGATTGTAAGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCAATGGATCGGAAGTATCCGAATGGGAGCAGATTGAACCGCGCAACAACTAACGGGTATTGGAAAGCGACAGGAAAAGATCGAAAGATTAAGTCTGGTGCTACCTTAATTGGAATGAAGAAGACTCTTGTTTTCTACGCTGGTCGTGCTCCGAAGGGGCAGAGGACTCATTGGATTATGCATGAGTATAGACCTACCTTAAAAGAGCTTGATGGCACCAACCCTGGACAGAACCCATATGTCCTTTGTCGCTTGTTTAAAAAGCAAGATGAGAGTCTTGCAAGTTCAAACTGTGGTGAAGCGGAGCAGACTACTTCAACTCCTACGACTGCCAATTACTCTCCAGAAGAAATACAGTCTGACCTAAATCTGGTTCCTCTATCTTCCTCACTAGCGACAGAAGATGAAAGGCACCTAGCAGCTATCCCTGAGAACTCCGAGGAAGCAATGTCCCACGTTATAACCACAGCTGATTGCTATAGCGATGCATGTAATGCTTCTGATGCACAACATCAGAGTTTAGAAGTACCGGCTGCAGAGGAAGATCAGCTGTTAAACTTGGACATATTTGACAGCCCACGATTTGAGCTTGAGCCATGGGATGATAAGTTATTCTCCCCAGCCCATGCACACTTTCCACCAGAATTTGGCCATCAAGCCAACAATGAATTAATTCAGTATGGTACAAATGGGACAGATGTTTCGGACTTTTTTGACTCGTGTGTTAATTGGGACGAGTTCTCCAGTGAGGCGTCTATCAGTCTTGAGCTAAGCCCAAACATTTTTAAAATTCCGGAAAATGGGTCGTGCAGCAACTCGGATGTGGAAATGGCCAATATGATGAACCTGCTAGCATCACATGATTATCCCGAGGGAGTGACTCTGCAAAACAGTGATGTAGGGTTGTTTCAGAACAATTCCCAGATGACTCTTTCTAATGATTTTAGCATGGGACAAATGCCCACTGTGGTAAATGAATATGAGCAAATGTGGAATTCGGATACTGTTGTCGATGGCGGCACTGGAATTGGGATAAGGTCTAGACAAAGACAAAATGAACAACCAGATATGAACCAGGTGATGCAAGCACAAGGAAGTGCACCAAGGAGAATACGATTGGGAGGATTTGTTGCGCGTTCCCTGGTTTCTGAGACGACGGAAGATGGGAGTTGTGCATCAGAATATGAGCAATCGAGGATTTTGGATACTGTTGTCCTTGGTGATGACACTGGTATAAGGATAAGGCGTCGACAAAGAAGAAATGAAGAGCCAAACATGAACCCAGTGATGCAAGCACAAGGTAGTGCACTGCGTAGAATACGATTAGGAGGATTTGTCAAGCATTCCCTTGTTTCCGAGGAGACTACAAAAGATGAGAGTTTGCAGGAGACGGAAGCTTCAGAAAACCATGCTGCTGCTGAGAGTGCTTCCGTCCTAGAGAAGACATCTCCCATGTCAGCAAGAGAGATCTGTGAGCAACATGTTACAACTGCAGAATCCAACTCGGGGTCGAAAAACTTTCTGTTGGGCAGGGTTCGGTGCACTTCAAAGACATCCTCGATCAGCGCTATGCGGTCTACTGTTCTTGCATATTCTGCCATTGATATGACCATACCCAAGTTCAATTACTAA 1893 0.4538 MGAVVECLPSPQQAEELAVLSLNKLPLGFRFRPTDEELVDFYLRMKINGNGDEVWVIREVDVCKFEPWDLPDLSIVRNKDPEWFFFCPMDRKYPNGSRLNRATTNGYWKATGKDRKIKSGATLIGMKKTLVFYAGRAPKGQRTHWIMHEYRPTLKELDGTNPGQNPYVLCRLFKKQDESLASSNCGEAEQTTSTPTTANYSPEEIQSDLNLVPLSSSLATEDERHLAAIPENSEEAMSHVITTADCYSDACNASDAQHQSLEVPAAEEDQLLNLDIFDSPRFELEPWDDKLFSPAHAHFPPEFGHQANNELIQYGTNGTDVSDFFDSCVNWDEFSSEASISLELSPNIFKIPENGSCSNSDVEMANMMNLLASHDYPEGVTLQNSDVGLFQNNSQMTLSNDFSMGQMPTVVNEYEQMWNSDTVVDGGTGIGIRSRQRQNEQPDMNQVMQAQGSAPRRIRLGGFVARSLVSETTEDGSCASEYEQSRILDTVVLGDDTGIRIRRRQRRNEEPNMNPVMQAQGSALRRIRLGGFVKHSLVSEETTKDESLQETEASENHAAAESASVLEKTSPMSAREICEQHVTTAESNSGSKNFLLGRVRCTSKTSSISAMRSTVLAYSAIDMTIPKFNY* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2325 630 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 20 442 - -
Mtr5g2325 630 SUPERFAMILY NAC domain 20 175 IPR036093 GO:0003677|GO:0006355
Mtr5g2325 630 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 20 442 - -
Mtr5g2325 630 Gene3D NAC domain 34 179 IPR036093 GO:0003677|GO:0006355
Mtr5g2325 630 MobiDBLite consensus disorder prediction 540 572 - -
Mtr5g2325 630 MobiDBLite consensus disorder prediction 182 201 - -
Mtr5g2325 630 Pfam No apical meristem (NAM) protein 26 151 IPR003441 GO:0003677|GO:0006355
Mtr5g2325 630 ProSiteProfiles NAC domain profile. 25 175 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2325 Mtr-Chr5 30532601 30537265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2325 17 460 NAC Transcription Factor Family AT4G35580 43.966 1.84e-99 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr5g2325 NAM 2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2325 - - mtr:MTR_5g069030 1252.65