Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2324 ATGTCTTCCAACCCTCCACCACCGGAAAATGATCCACCACCAGCGACATCGTCGCCGGTATCCGCTAAATCCAGAACTCTTCAGAAATTCCCTCCCATTGTAAACCGACGCACCGCGACATTATCATCAAACAATGTAGACGACGAATGCAAAGAAGAGAATAATAAGAACAAGAATCATGACAATGAGGAGGAAAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGTTCTTGTAACTGAACGTGAATTCGAACGTGCTGAATGTTCTTATTCTTCTTCCATTTTGCAAGCTTCGTCGTTAGGTCTTAATCAAATTCGAACGCGATTCTCTTCGCCTCTTCGTCATTCTTCTTCTGCTGGTGCTCCATCTTTCCCTATAAAAGATGTTGTCAACAATGTCGCTAAATTTAGATCTAGAGTTTCACATCCTAAAGACCTAGGGGAAAAAGTTCATTGGAATCAATCCAAATCGTTGAAAGCTCGTTCACAACTCCTCATACTGGAGGGAAATCATGCAGCTTATGCCAAAGATTTTCAATCCCCACGTTATCAGGAAATTCTTCGACTTACAAGTGGTAAGAAAAGGAAAAACCGGCCTGATATTAAAAGCTTTTCCCATGAACTTAACTCCAAAGGAGTTAGGCCTTTTCCAGTCTGGAAAAATCGTGCCTTTGGGCAGGAAATCATGGAGGAGATTAGAGCTAAGTTTGAAAAACTAAAGGAAGAAGTTGATTCTGATTTGGGTGGTTTTGCTGGTGATTTGGTGGGTACTCTTGAAAAAATACCTGGGTCTCATCCTGAATGGAAAGAGGGGTTGGAAGATTTGTTGGTTGTTGCTCGACAATGTGCAAAGATGACAGCGGCTGAGTTTTGGATCAACTGTGAAACTATTGTTCAAAAACTAGATGATAAACGTCAAGATATACCGGTGGGGATCCTCAAGCAAGCACATACGCGCCTGTTGTTTATTCTCTCTAGGTGCACTCGTCTAGTGCAATTCCAGAAGGAAAGTGTTAAAGAACAAGATCACATTCTTGGTCTTCACCAACTCAGCGATCTTGGAGTATATTCCGAGCAAATTATGAAGGCTGAAGAGAGTTGCGGTTTTCCACCCAGTGACCATGAGATGGCTGAGAAGCTGATAAAAAAGTCACATGGGAAAGAGCAAGACAAACCGATTACAAAACAAAGTCAAGCTGATCAACATGCAAGTGTTGTGATTGATAATGTGGAAGTTACTACGGCAAGTACTGATTCGACTCCTGGAAGCAGCTATAAGATGGCTTCTTGGAGAAAGCTTCCATCTGCTGCGGAGAAAAATCGTGTAGGTCAAGATGCAGTAAAAGATGAAAATGCTGAAAACTGGGATACTTTGTCATGTCACCCTGATCAACATTCACAGCCGTCATCTAGAACGCGGAGGCCTTCTTGGGGATATTGGGGAGATCAGCAAAATCTATTACATGATGATTCAATGATCTGCAGGATTTGTGAGGTTGAAATACCAATATTACATGTGGAGGAGCATTCTCGAATATGTACAATTGCTGATAAATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTTGAAAGAGTTGCCGAAACAATTGAAATGTTACTTGATTCCTTGACACCAACATCAAGTTTGCATGAAGAGTTCAATGAGTTATCTCTAGAAAGAAATAACATGTCATCTAGATGCTCTGAAGATATGCTTGACCTTGCTCCTGACAATACTTTTGTTGCGGATGATCTAAACCTTTCACGGGAAATATCATGCGAGGCTCATAGCTTAAAACCTGATCATGGCGCAAAGATATCTTCTCCTGAAAGCTTGACACCGCGATCACCGTTGATTACACCCAGAACAAGTCAGATAGAAATGTTACTAAGTGTAAGTGGAAGAAGACCAATATCTGAACTTGAGAGTTACGACCAGATAAACAAGCTAGTTGAAATAGCTCGTGCTGTTGCAAATGCGAACAGCTGTGACGAAAGTGCTTTCCAGGATATCGTTGATTGCGTGGAAGACCTGAGATGCGTAATTCAGAACAGAAAAGAGGATGCACTTATTGTGGATACTTTCGGTCGACGAATAGAGAAACTTTTGCAAGAAAAATATTTAACTCTTTGTGAGCAAATACACGATGAAAGGGCAGAATCATCAAATAGCATGGCTGATGAAGAGAGTTCAGTGGATGATGATACAATCCGTAGCCTTCGTGCTAGCCCAATTAATGGTTTTTCTAAGGACAGAACCTCTATTGAAGATTTTGAAATAATAAAACCAATAAGCAGAGGTGCGTTTGGACGAGTTTTTCTTGCCCAGAAAAGATCGACTGGTGATTTATTTGCTATTAAGGTTCTGAAAAAGGCAGATATGATTCGTAAAAATGCAGTTGAAGGTATTTTGGCTGAGCGAGACATTCTTATATCTGTTCGAAACCCTTTTGTGGTCCGATTTTACTATTCTTTCACATGTAAAGAAAATCTGTATTTGGTTATGGAGTACTTAAATGGTGGAGATCTCTATTCTATGTTGAGAAACTTAGGTTGCTTAGATGAAGATATGGCTCGTGTATATATTGCAGAAGTTGTTCTTGCGTTGGAGTATTTGCATTCGCAAAGCATAGTTCACAGAGACTTAAAGCCAGATAACTTACTGATCGGACAAGATGGTCATATTAAGTTGACAGACTTTGGACTCTCAAAAGTTGGTCTCATCAACAGCACGGAGGATTTATCAGCACCCGCATCTTTCACTAATGGTTTTTTAGTCGATGATGAACCAAAACCTCGACATGTTTCAAAAAGGGAGGCACGTCAACAACAATCAATAGTTGGCACTCCAGATTATTTGGCACCCGAAATACTTTTGGGCATGGGACATGGTACAACTGCAGATTGGTGGTCTGTGGGTGTCATACTTTACGAGCTTCTTGTGGGTATTCCACCTTTTAATGCAGATCATGCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCAAAGCATCCTGAGGAGATCAGCTTTGAAGCATACGATTTGATGAACAAATTACTGATCGAAAACCCAGTCCAAAGATTAGGTGTAACAGGAGCAACAGAAGTTAAACGCCATGCTTTCTTCAAGGATGTTAATTGGGATACGCTAGCAAGGCAGAAGGCTATGTTCATACCATCGGCTGAAGCTCACGATACAAGTTATTTCATGAGCCGCTACATTTGGAATGTAGAGGATGATGAACATTGTGCTGGAGGTAGTGATTTTTATGACCATTCTGAAACATCCAGCAGTGGTTCAGGAAGCGATTCATTAGATGAAGATGGTGATGAATGCGCTAGTTTAACAGAATTCGGTAATTCAGCTCTTGGCGTGCAGTACTCGTTTAGTAACTTCTCATTTAAGAATATAAGTCAGCTAGTGTCTATCAATATGATGCATATCTCCAAAGAAACACCGGACGACTCCAACCCGTCGTGA 3507 0.4069 MSSNPPPPENDPPPATSSPVSAKSRTLQKFPPIVNRRTATLSSNNVDDECKEENNKNKNHDNEEESEEEEEEEEEEEEDVLVTEREFERAECSYSSSILQASSLGLNQIRTRFSSPLRHSSSAGAPSFPIKDVVNNVAKFRSRVSHPKDLGEKVHWNQSKSLKARSQLLILEGNHAAYAKDFQSPRYQEILRLTSGKKRKNRPDIKSFSHELNSKGVRPFPVWKNRAFGQEIMEEIRAKFEKLKEEVDSDLGGFAGDLVGTLEKIPGSHPEWKEGLEDLLVVARQCAKMTAAEFWINCETIVQKLDDKRQDIPVGILKQAHTRLLFILSRCTRLVQFQKESVKEQDHILGLHQLSDLGVYSEQIMKAEESCGFPPSDHEMAEKLIKKSHGKEQDKPITKQSQADQHASVVIDNVEVTTASTDSTPGSSYKMASWRKLPSAAEKNRVGQDAVKDENAENWDTLSCHPDQHSQPSSRTRRPSWGYWGDQQNLLHDDSMICRICEVEIPILHVEEHSRICTIADKCDLKGLTVNERLERVAETIEMLLDSLTPTSSLHEEFNELSLERNNMSSRCSEDMLDLAPDNTFVADDLNLSREISCEAHSLKPDHGAKISSPESLTPRSPLITPRTSQIEMLLSVSGRRPISELESYDQINKLVEIARAVANANSCDESAFQDIVDCVEDLRCVIQNRKEDALIVDTFGRRIEKLLQEKYLTLCEQIHDERAESSNSMADEESSVDDDTIRSLRASPINGFSKDRTSIEDFEIIKPISRGAFGRVFLAQKRSTGDLFAIKVLKKADMIRKNAVEGILAERDILISVRNPFVVRFYYSFTCKENLYLVMEYLNGGDLYSMLRNLGCLDEDMARVYIAEVVLALEYLHSQSIVHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTEDLSAPASFTNGFLVDDEPKPRHVSKREARQQQSIVGTPDYLAPEILLGMGHGTTADWWSVGVILYELLVGIPPFNADHAQQIFDNIINRDIQWPKHPEEISFEAYDLMNKLLIENPVQRLGVTGATEVKRHAFFKDVNWDTLARQKAMFIPSAEAHDTSYFMSRYIWNVEDDEHCAGGSDFYDHSETSSSGSGSDSLDEDGDECASLTEFGNSALGVQYSFSNFSFKNISQLVSINMMHISKETPDDSNPS* 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2324 1168 Pfam Protein kinase domain 763 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2324 1168 SMART serkin_6 763 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2324 1168 ProSiteProfiles Protein kinase domain profile. 763 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2324 1168 SUPERFAMILY Protein kinase-like (PK-like) 749 1074 IPR011009 -
Mtr5g2324 1168 MobiDBLite consensus disorder prediction 461 481 - -
Mtr5g2324 1168 MobiDBLite consensus disorder prediction 1 15 - -
Mtr5g2324 1168 MobiDBLite consensus disorder prediction 1 80 - -
Mtr5g2324 1168 MobiDBLite consensus disorder prediction 400 430 - -
Mtr5g2324 1168 MobiDBLite consensus disorder prediction 446 460 - -
Mtr5g2324 1168 MobiDBLite consensus disorder prediction 46 63 - -
Mtr5g2324 1168 Gene3D Transferase(Phosphotransferase) domain 1 847 1069 - -
Mtr5g2324 1168 MobiDBLite consensus disorder prediction 604 623 - -
Mtr5g2324 1168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 882 894 IPR008271 GO:0004672|GO:0006468
Mtr5g2324 1168 MobiDBLite consensus disorder prediction 31 45 - -
Mtr5g2324 1168 CDD STKc_MAST_like 769 1056 - -
Mtr5g2324 1168 Gene3D Phosphorylase Kinase; domain 1 761 1078 - -
Mtr5g2324 1168 MobiDBLite consensus disorder prediction 64 80 - -
Mtr5g2324 1168 ProSiteProfiles AGC-kinase C-terminal domain profile. 1052 1153 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mtr5g2324 1168 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 23 1168 - -
Mtr5g2324 1168 MobiDBLite consensus disorder prediction 387 481 - -
Mtr5g2324 1168 MobiDBLite consensus disorder prediction 1095 1120 - -
Mtr5g2324 1168 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 1168 - -
Mtr5g2324 1168 Coils Coil 43 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2324 Mtr-Chr5 30515699 30524913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2324 1 1168 AGC Kinase Gene Family AT5G62310 58.838 0.0 1306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Mtr5g2324 Pkinase 2.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2324 - - gmx:100806311 1588.16