Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2320 ATGAACTTTTCTGGTACCATAACAAAACCCAATTTCCCATTTCCCCCAACAGAAATGCCAATTCTAACATTTGGTCATTCTAAGTTAACTGCTGCTACACTAGCTCTTCAATTGCCATGTAATTATATTAGGAAGATAAGGTTTATTACAAAGCTTCAATGTTCTGTTGCTGGTAGGACGGATAGTTATAGGACCAGTGCTGCTGATTCGCAGGGATCCAAACGGGACTCTGGCGAAATTCAAAGGAAACGGAGAGGGGCATCATCTTTGTATGCTGGTTATGCTCGTCCGAGTTTATCTGAAATGAAGAAAGATAAAGCGACGTTGCGCAAAGTTGTTTATGAGTTCTTGCGAGGAATCGGCATTGTTCCTGATGAGCTGGATGGTCTTGAACTTCCTGTTACTGTTGATGTTATGAAGGAGCGTGTTGATTTTCTTCATAGTTTGGGGCTTACGATTGAAGACATTAACAACTATCCTCTTGTATTGGGATGTAGTGTCAAGAAGAATATGGTTCCTGTGCTTGATTACCTTGGTAAATTGGGAGTAAGGAAATCCACGATCACGCAGTTTTTGCGGACATATCCACAAGTGCTTCATGCTAGTGTGGTTGTGGATCTTGTGCCGGTGGTCAAGTATCTTCAGGGGATGGATATCAAGCCGGATGATATTCCTCGTGTTCTTGAGAGGTATCCTGAAGTGTTGGGATTCAAACTTGAGGGAACCATGAGTACATCTGTTGCTTATTTGATTGGAATCGGTGTTGGAAGAAGAGAACTCGGAGGTATCTTAACTAGATTCCCGGAGATTTTGGGGATGCGGGTTGGTAGAGTCATCAAGCCTTTTGTGGAGTATCTGGAAAGCTTGGGTATTCCAAGGCTAGCTATTGCTAGACTGATAGAGACACAACCTTATATTCTTGGATTCGATTTGGACGAGAAAGTGAAGCCAAACGTCAAATCCCTCGAAGAGTTTAATGTTCGGGAGACATCGCTTGCCTCTATAATTGCTCAGTATCCTGACATCATTGGAACCGACCTAGAGCCAAAGCTTGCAGATAAGAGAAGTGTGCTCAATTCTGTGCTTGATTTGGATGCTGAGGATTTCGGCTTAATCATTGAGAAGATGCCGCAGGTAGTTAGCCTCAGTAGCACTCCTATGCTAAAGCACGTTGATTTTCTTAAGGATTGTGGGTTTTCTGTGGATCAAATGAGGAAGATGATTGTTGGGTGCCCTCAACTACTTGCTTTAAACATTGATATCATGAAACTTAGCTTCGATTACTTCCAAAGTGAGATGGAAAGGCCTTTGGAAGATTTGGTTGAATTCCCAGCATTCTTCACTTATGGTTTGGAGTCAACTATAAAACCTAGGCATAACATGGTTACTAAGAAAGGACTGAAGTGTTCTCTGGCATGGATGCTTAATTGCTCTGATGAGAAATTTGAGCAACGAATGGACTATGACACTATCGATATGGAAGAGATGGAAATGGAACCATCATTTGACATGAATTCATTGATGCGACCAAGGAGCGATGAATCAGATTCTGATTATGAAGACAGTGATTATGAGGATGATGATGATGAGTAA 1593 0.4181 MNFSGTITKPNFPFPPTEMPILTFGHSKLTAATLALQLPCNYIRKIRFITKLQCSVAGRTDSYRTSAADSQGSKRDSGEIQRKRRGASSLYAGYARPSLSEMKKDKATLRKVVYEFLRGIGIVPDELDGLELPVTVDVMKERVDFLHSLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTITQFLRTYPQVLHASVVVDLVPVVKYLQGMDIKPDDIPRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRRELGGILTRFPEILGMRVGRVIKPFVEYLESLGIPRLAIARLIETQPYILGFDLDEKVKPNVKSLEEFNVRETSLASIIAQYPDIIGTDLEPKLADKRSVLNSVLDLDAEDFGLIIEKMPQVVSLSSTPMLKHVDFLKDCGFSVDQMRKMIVGCPQLLALNIDIMKLSFDYFQSEMERPLEDLVEFPAFFTYGLESTIKPRHNMVTKKGLKCSLAWMLNCSDEKFEQRMDYDTIDMEEMEMEPSFDMNSLMRPRSDESDSDYEDSDYEDDDDE* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2320 530 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 32 516 - -
Mtr5g2320 530 Pfam mTERF 175 483 IPR003690 GO:0003690|GO:0006355
Mtr5g2320 530 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Mtr5g2320 530 SMART mt_12 189 220 IPR003690 GO:0003690|GO:0006355
Mtr5g2320 530 SMART mt_12 225 256 IPR003690 GO:0003690|GO:0006355
Mtr5g2320 530 SMART mt_12 437 468 IPR003690 GO:0003690|GO:0006355
Mtr5g2320 530 SMART mt_12 370 400 IPR003690 GO:0003690|GO:0006355
Mtr5g2320 530 SMART mt_12 297 328 IPR003690 GO:0003690|GO:0006355
Mtr5g2320 530 SMART mt_12 261 292 IPR003690 GO:0003690|GO:0006355
Mtr5g2320 530 SMART mt_12 153 184 IPR003690 GO:0003690|GO:0006355
Mtr5g2320 530 SMART mt_12 333 365 IPR003690 GO:0003690|GO:0006355
Mtr5g2320 530 PANTHER CGI-12 PROTEIN-RELATED 32 516 IPR003690 GO:0003690|GO:0006355
Mtr5g2320 530 MobiDBLite consensus disorder prediction 499 530 - -
Mtr5g2320 530 MobiDBLite consensus disorder prediction 63 85 - -
Mtr5g2320 530 Gene3D Transcription termination factor 3, mitochondrial 155 279 IPR038538 -
Mtr5g2320 530 Gene3D Transcription termination factor 3, mitochondrial 280 492 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2320 Mtr-Chr5 30480092 30482360 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr5g2320 mTERF 7.2e-109 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2320 K15032 - gmx:100785223 787.334