Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2318 ATGGGAAACACAGAGAGAATTGAAAGTATGAAGGAATGGTTCAAATCATCACAAGCACTTCTTAGTATGTTATTAGTGCAAATATTTGCAACTGGGATGCAACTTCTATCAAGAGTCATTTTGGTTCAAGGGACTTACATTTTTGCACTCATTGCTTATCGACATATTGTTGCTGCTATTTGTGTTGCTCCTTTTGCACTCTATTTTGAAAGGGAAAAGGAGAAGAAATTCAATTGGAGTGTTTGGTTCTGGCTTTTCCTTAACGGATTAATGGGGATGACAATGGCTCTAGGGTTATTCTATTATGGTCTTCGAGACACAACTGCTGCTTATTCAGTCAATTTTCTCAACTTGGTACCTATTTGCACATTCTTAACCTCTATAATATTCAGAATGGAGAATTTGAAGATTGGAACATGGGGTGGTAGAGCCAAGTGTATAGGAGCTATTATGTGTGTTGGTGGAGCATTAGCAACGAGTCTTTACAAAGGGAAGGAATTTTATATTGGTCATCATCATCATCATCATAGTCACCATTCTGCTGAGATTAGTGCTGTTGCAGCACACAAAACTCGCATGTTTCGTGGCACTTTCTTTTTGGTTGGAGCATGCTGTTCTTACACTGCTTGGTTTATTCTTCAAGTAAAATTGGTGAAGGTATTTCCGTTGAGGTATTGGGGAACAATGCTATCATGTGTTATGGCGGCGATTCAGTCAGCAGTAATAGGCGCATGCGTAAATCAAAGTAAAGAAGCTTGGAGATTAGACTGGAATCTTCAGCTTATTACTATACTTTACTCGGGAGCATTGGCTACTGCTGCTACATTTTGTTTACTATCATGGGCAATTACCATTAAAGGACCTACTTACCCTCCGATGTTTAATCCGTTGGCTCTTATTTTCGTTGCCATATCAGAGGCTATCATACTTGGCGAACCGTTAAGGGTTGGAACTTTGCTAGGCATGGTTTTGATCATAATGGGATTGTACTACTTTCTATGGGGGAAAAGGAATGAGGTACCACGTTTGCCTCAAACAAATGTAGCTGCTGCAGAATTATCAACAAGTATGGCTGATCACTCTACTGTTGTAGTGCCAAGTTCTTTTCCAAATGAAAGTGTACATCTTCACATTAATAAAACTCAGAAAATCTGA 1155 0.3913 MGNTERIESMKEWFKSSQALLSMLLVQIFATGMQLLSRVILVQGTYIFALIAYRHIVAAICVAPFALYFEREKEKKFNWSVWFWLFLNGLMGMTMALGLFYYGLRDTTAAYSVNFLNLVPICTFLTSIIFRMENLKIGTWGGRAKCIGAIMCVGGALATSLYKGKEFYIGHHHHHHSHHSAEISAVAAHKTRMFRGTFFLVGACCSYTAWFILQVKLVKVFPLRYWGTMLSCVMAAIQSAVIGACVNQSKEAWRLDWNLQLITILYSGALATAATFCLLSWAITIKGPTYPPMFNPLALIFVAISEAIILGEPLRVGTLLGMVLIIMGLYYFLWGKRNEVPRLPQTNVAAAELSTSMADHSTVVVPSSFPNESVHLHINKTQKI* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2318 384 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020|GO:0016021
Mtr5g2318 384 Pfam EamA-like transporter family 20 151 IPR000620 GO:0016020|GO:0016021
Mtr5g2318 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 337 - -
Mtr5g2318 384 PANTHER WAT1-RELATED PROTEIN 17 355 IPR030184 GO:0016021|GO:0022857
Mtr5g2318 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 153 - -
Mtr5g2318 384 PANTHER WAT1-RELATED PROTEIN 17 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2318 Mtr-Chr5 30460837 30464968 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2318 21 336 Nodulin-like Gene Family AT1G09380 36.164 1.10e-63 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2318 - - gmx:100782551 521.931