Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2316 ATGGCTTCCATAAGCTATATCCTCCTCCTCATATTTTCCTTCTTCAATCTAGTTCATTCAGCTAGCAATGCTTCTTCAATCAATGTAACCAAACACTTTTCCTTCCATGATTTCAGCTTCACTAATAACTCAAGATTAGTCCATGATGTGAAGCTTCTAGGAAGTGCAAAGTTCTCAGATGAAAAGGGTTCACTTCAAATCCCAAATGAATCAGAAGAAACAGATATAAGACATCAAGCAGGTAGAGGTTTATATTCCTTCCCAATTCGTTTGTTAGATCCAATCACCAAAACACCAGCTTCTTTTCAAACCACCTTTTCTTTTCAGCTTAATAATTTAACTACTGCTTCTGATATAAGTGATTATGGTGGTGGTAGTGGACTTACTTTCATCATTGTACCTGATGAATTCACTGTTGGAAGGCCAGGACCTTGGCTTGGTATGCTTAATGATGCTTGCGAGAGCGATTATAAAGCCGTTGCAATTGAGTTTGATACACGAGAAAATCCAGAATTCGGTGATCCAAATGATAACCATGTTGGTATAAATTTAGGTAGCATAGTATCTACTAAAATTATCAATGTTTCAGATATTGGAGTTTCTCTTAAGGATGGTTTTGTTCACCATGCTTGGATTGATTATGATGGTCCTCAAAGACGAATTGACATTCGTTTAGGACTTGCTAATCAAGATGTTTATCCTACTAAGCCTATTTTCTCGGAGTTTATGGATCTTTCACCTTATCTGAATGAGTATATGTTTGTAGGATTCTCTGCTGCAACCGGTAACCATACACAAATTCATAACATACTTTCTTGGAACTTTACTTCCACTAGCCAAGCTTTTCTTCGCTACCCTTCATCTGAAACATGTCAAGGTAAGATCATGCTTGAGAAAACTACTACAGAAACAACAGCTGCTAAAGAGAACTCTAAAAGAAATGAAACTCCGCGTAGCTTTTTAATTTTTATGGCTTCTGTAGTGTTGGCTTTAGTTGTTTTGATTGGTTTTTACTTTATCAGTAAGCATAGAAAAAGGGCAGCTAAATCAAACACTTCAATAGATGAAGAGATTCATAGGCCAAGGCCTCCTAACAAACCGCGCAGATTCCGTTTTTCCGAACTTTCCTCTTCAACTAGATCATTCAATGAGATAGAGGTACTTGGAAGTGATAATAGAGGAGTTTTCTACAGAGGAAAGCTTGCTAATGGAAATCAAGTAGCTTTGAAAAGATTCTCAGCCCAGTTTCTCAGTACACACGGATCTGATAAGAAGCGTTTGCTGAAGGAAATCAAAGTTATTAGCCACGTTCGCCACCCGAATTTACTTCCTATAAGAGGCTGGTGTCAAGACAACAACGAAATCGTTGCGGTCTATGATTTTGTTCCTAATGGTAGCCTCGATAAATGGCTGTTCGGAGCCGGGGTTCTTCCGTGGACGAGGCGGTTCAAAGTCATCAAAGACGTTGCCGACGGCTTGAGTTTCTTGCACACTAAGCAGCTAGCTCACAAGAACTTGAAATGCAGCAGTGTTTTTCTGGATGTTAGCTTCAGAGCTGTTTTGGGAGATTTTGGATTTGTGCTTATGGGAGCAGAATCAAAACAGTTTGAATCAGTAGTGTGTAATGGTGCTGATGTGTTTGAATTTGGTGTAATTGTGTTGGAAGTGATAGGTGGAAGGCCAAGGGTAGAGGATACAGAAGAAGGAAAATCAGAAGAGAGGAACTTGTTGGATTTTGCATGGAACTTGCATGAGATTAACGACAAAGGGAAGCTGGTTGATAGAAGAATGGGATCATTGATCAATTTGGAGCAAGCGATTCGTGTTATGGAAATAGGGTTGCTTTGTACTTTGAATGAGAACAAAGGAAGGCCTACAATGGAGCAAGTTGTTGAGTTTCTTCATAACATGGAGAAGCCTATTCCTGAGTTGCCAAAAACTAGACCTGTTGCTTTGTTTCCTTACAACAGTGCCAACACTGGACTTTGCAATAACTACTCTTGCACTTTGAAGCTGTGA 2019 0.3933 MASISYILLLIFSFFNLVHSASNASSINVTKHFSFHDFSFTNNSRLVHDVKLLGSAKFSDEKGSLQIPNESEETDIRHQAGRGLYSFPIRLLDPITKTPASFQTTFSFQLNNLTTASDISDYGGGSGLTFIIVPDEFTVGRPGPWLGMLNDACESDYKAVAIEFDTRENPEFGDPNDNHVGINLGSIVSTKIINVSDIGVSLKDGFVHHAWIDYDGPQRRIDIRLGLANQDVYPTKPIFSEFMDLSPYLNEYMFVGFSAATGNHTQIHNILSWNFTSTSQAFLRYPSSETCQGKIMLEKTTTETTAAKENSKRNETPRSFLIFMASVVLALVVLIGFYFISKHRKRAAKSNTSIDEEIHRPRPPNKPRRFRFSELSSSTRSFNEIEVLGSDNRGVFYRGKLANGNQVALKRFSAQFLSTHGSDKKRLLKEIKVISHVRHPNLLPIRGWCQDNNEIVAVYDFVPNGSLDKWLFGAGVLPWTRRFKVIKDVADGLSFLHTKQLAHKNLKCSSVFLDVSFRAVLGDFGFVLMGAESKQFESVVCNGADVFEFGVIVLEVIGGRPRVEDTEEGKSEERNLLDFAWNLHEINDKGKLVDRRMGSLINLEQAIRVMEIGLLCTLNENKGRPTMEQVVEFLHNMEKPIPELPKTRPVALFPYNSANTGLCNNYSCTLKL* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2316 672 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 14 652 - -
Mtr5g2316 672 SUPERFAMILY Protein kinase-like (PK-like) 359 634 IPR011009 -
Mtr5g2316 672 Gene3D Phosphorylase Kinase; domain 1 352 461 - -
Mtr5g2316 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 279 IPR013320 -
Mtr5g2316 672 CDD lectin_legume_LecRK_Arcelin_ConA 38 278 IPR001220 GO:0030246
Mtr5g2316 672 Gene3D Transferase(Phosphotransferase) domain 1 462 643 - -
Mtr5g2316 672 MobiDBLite consensus disorder prediction 350 369 - -
Mtr5g2316 672 Gene3D - 29 282 - -
Mtr5g2316 672 ProSiteProfiles Protein kinase domain profile. 382 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2316 672 MobiDBLite consensus disorder prediction 350 370 - -
Mtr5g2316 672 PANTHER - 14 652 - -
Mtr5g2316 672 Pfam Protein tyrosine and serine/threonine kinase 385 527 IPR001245 GO:0004672|GO:0006468
Mtr5g2316 672 Pfam Legume lectin domain 32 281 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2316 Mtr-Chr5 30446642 30449105 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2316 3 653 Receptor kinase-like Gene Family AT5G55830 31.341 1.87e-91 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr5g2316 PK_Tyr_Ser-Thr 1.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2316 - - gmx:100781464 1084.71