Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2298 ATGTTCTATGAACTTCCTGTGCACCCGCTGCCGCCACCACGTACTTCACCATCTACCAATCACAAAGGTATGTATGCATGTAATCCTTCAAAAGGGGCTACAAATGACTTCTCTGATTCTAATAAACTTGGGGAAGGTGGATTTGGAGCTGGTAGGCTCTCTAATGGACAAACGATCGCTGTTAAAAGGTTGTCCATGAATTCTGGCCAAGGAGATATAGAATTTAAGAATGAAGTGCTTTTAATGGCCAAACTTCAACACCGGAATTTGGTTAGACTACTTGGTTTTACTATTGAAGGGAGAGAAAGACTACTTGTCTATGAATTTATTCCCAATAAAAGTCTAGACTACTTCATATTCGATCCACTGAAGAAAGCACAATTAGATTGGGAGAAGCGCTACAAAATCATTCAAGGCATTGCTCGAGGCGTTCTTTATCTTCATGGGGATTCAAGACTGCGTATTATACACCGCGATCTCAAAGCAAGCAACATTCTCTTAGACGAAGACGTGAATGCTAAGATCTCAGATTTTGGCATGGCAAGACTTATTCTTGTGGATCAAACCCAAGCAAATACAAGTAGAGTTGTTGAAACCTAG 600 0.4067 MFYELPVHPLPPPRTSPSTNHKGMYACNPSKGATNDFSDSNKLGEGGFGAGRLSNGQTIAVKRLSMNSGQGDIEFKNEVLLMAKLQHRNLVRLLGFTIEGRERLLVYEFIPNKSLDYFIFDPLKKAQLDWEKRYKIIQGIARGVLYLHGDSRLRIIHRDLKASNILLDEDVNAKISDFGMARLILVDQTQANTSRVVET* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2298 199 Gene3D Phosphorylase Kinase; domain 1 16 109 - -
Mtr5g2298 199 Pfam Protein tyrosine and serine/threonine kinase 41 191 IPR001245 GO:0004672|GO:0006468
Mtr5g2298 199 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 22 199 - -
Mtr5g2298 199 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Mtr5g2298 199 SUPERFAMILY Protein kinase-like (PK-like) 23 193 IPR011009 -
Mtr5g2298 199 MobiDBLite consensus disorder prediction 1 20 - -
Mtr5g2298 199 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 199 - -
Mtr5g2298 199 SMART serkin_6 37 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2298 199 Gene3D Transferase(Phosphotransferase) domain 1 110 199 - -
Mtr5g2298 199 MobiDBLite consensus disorder prediction 1 16 - -
Mtr5g2298 199 ProSiteProfiles Protein kinase domain profile. 37 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2298 Mtr-Chr5 30220311 30221159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2298 31 199 Receptor kinase-like Gene Family AT4G23230 69.767 1.49e-82 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr5g2298 Pkinase 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2298 - - mtr:MTR_5g068290 392.504