Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2297 ATGAGATTTAAAATTTGCTGTAGTTTTCTCCTTCTCATCATAACCACATTCCTATGTTATGAAACCATTGCCCAACCAGATTTTACTCCACGATGTGCTGATGATAATGGCAACTACACAAAAAACAGCACATATCAACAAAACCTCAACACACTTTTATCAACTCTAACTTCCAACACAGAAATCACCTACGGTTTCTACAACTTCTCATTCGGCGAAGACAACAACAAAGTATACGCCATAGGATTATGCAGAGGAGATGTTAATCCAAATGATTGCCGCAGTTGTCTTAACAATTCAAGAGTTCTTCTAACACAAAAATGTCCTAACCAAAAAGAAGCAATTGGTTGGATTGACAAATGCATGCTGCGTTACGCAAGTACGTCTATTTTTGGACAGATGGAAACGGAACCTGGATTATCTCTGTGGAATCCGTTTAATGCAACGGATGTGGATAATTACAACAAAGTGTTGAACAAACTGTTGAATGATTTGAAAAATCAAGCTGCAACTGGTGATTCTTTGAAAAAATATGCTACAGCAAATGTAACAGGTCCAAATTTTCAAGATATATATAGTCTTATGCAGTGTACACCTGATGTAAGTTACTTGGATTGCAATCAATGTTTGGTTCAAGCTATAGCTAGTCTTCCATCTTGTTGTGAAAATAAGATAGGTGGGAGAGTTATTGGACCAAGTTGTATTCTTAGATATGAAAGATATCTGTTCTATGAACTTCCTGTGCACCCGCTGCCGCCACCACCTACTTCACCATCTACCAATCACAAAGGAAAGAATCATACATCAAGAACTTCCATCATAATAGCAATCCCAATTGTTATTGTTGTTTTGGTTCTCTGTTTCATCTGCATCTATCTACGACTACAAGTGAAGAAACCAAGGGAAAGTATTAAAATTCCTTCAGCAGATGATGAAGAAATTACAACCTTTGAGTCATTACAATTACCCTTTGACACTTTAAAAGTTGCTACAAATGACTTCTCAGATTCTAATAAACTTGGGGAAGGCGGATTTGGAGCTGTATATCAGGGTAGGCTCTCTAATGGACAAGCGATCGCTGTTAAAAGGTTGTCCATTAATTCTGGCCAAGGAGATAGAGAGTTTAAGAATGAAGTGCTTTTAATGGCCAAACTTCAACACCGGAATTTAGTTAGACTACTTGGTTTTACTATTGAAGGGAGAGAAAGACTACTTGTCTATGAATTTATTCCCAATAAAAGTCTTGACTACTTCATATTTGATTCACTGAAGAAAGCACAATTAATTTGGGAAAAGCGCTACAAAATCATTCAAGGTATTGCTCGAGGCGTTCTTTACCTTCATGAGGATTCTCGACTGCGTATTATACACCGCGATCTCAAAGCAAGCAACATTCTCCTAGACGAAGACATGAATGCTAAGATTTCAGATTTTGGCATGGCAAGACTAATTCTATTGGATCAAACCCAAGCAAATACAAGTAGAGTTGTTGGAACCTACGGATATATGGCACCTGAGTATGTAATGCATGGAGAATTTTCAGTGAAATCAGATGTCTTTAGTTTTGGTGTTCTGGTTCTTGAGATTATAAGTGGCCAAAAGAATAGTTGCATTCGTCACGGGGAAAATACGGAGGATCTATTGAGCTTTGCATGGAGAAGTTGGAGGGAAGGAACAGCTGCAAATATTATTGATTCATCACTATACAACAGTTCAAGAAATGAAATCATGAGATGCATTCATATTGGTTTACTTTGCGTCCAAGACAACGTAACTAGAAGACCAACCATGGCTAACATTGTACTCATGCTAAGTAGCTATTCTCTCGCCCTCTCTATACCTTCAGAACCTGCATTTTTTATGGATAGTAGAACTAGAAGCCTTCAAGAGATGAGGCTGTGGGAAGAGAAGTCAGGGACAACAAGATCAAGTCAATCCACAAGTAAATCAGCTCCAGAATCAGTAAATGAGGCTTCATTTACTGATCCATATCCTCGTTAG 2001 0.3798 MRFKICCSFLLLIITTFLCYETIAQPDFTPRCADDNGNYTKNSTYQQNLNTLLSTLTSNTEITYGFYNFSFGEDNNKVYAIGLCRGDVNPNDCRSCLNNSRVLLTQKCPNQKEAIGWIDKCMLRYASTSIFGQMETEPGLSLWNPFNATDVDNYNKVLNKLLNDLKNQAATGDSLKKYATANVTGPNFQDIYSLMQCTPDVSYLDCNQCLVQAIASLPSCCENKIGGRVIGPSCILRYERYLFYELPVHPLPPPPTSPSTNHKGKNHTSRTSIIIAIPIVIVVLVLCFICIYLRLQVKKPRESIKIPSADDEEITTFESLQLPFDTLKVATNDFSDSNKLGEGGFGAVYQGRLSNGQAIAVKRLSINSGQGDREFKNEVLLMAKLQHRNLVRLLGFTIEGRERLLVYEFIPNKSLDYFIFDSLKKAQLIWEKRYKIIQGIARGVLYLHEDSRLRIIHRDLKASNILLDEDMNAKISDFGMARLILLDQTQANTSRVVGTYGYMAPEYVMHGEFSVKSDVFSFGVLVLEIISGQKNSCIRHGENTEDLLSFAWRSWREGTAANIIDSSLYNSSRNEIMRCIHIGLLCVQDNVTRRPTMANIVLMLSSYSLALSIPSEPAFFMDSRTRSLQEMRLWEEKSGTTRSSQSTSKSAPESVNEASFTDPYPR* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2297 666 Gene3D - 139 243 IPR038408 -
Mtr5g2297 666 Gene3D - 28 129 IPR038408 -
Mtr5g2297 666 Gene3D Phosphorylase Kinase; domain 1 298 409 - -
Mtr5g2297 666 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 9 633 - -
Mtr5g2297 666 MobiDBLite consensus disorder prediction 638 657 - -
Mtr5g2297 666 Pfam Protein tyrosine and serine/threonine kinase 337 602 IPR001245 GO:0004672|GO:0006468
Mtr5g2297 666 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 633 - -
Mtr5g2297 666 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Mtr5g2297 666 SUPERFAMILY Protein kinase-like (PK-like) 316 604 IPR011009 -
Mtr5g2297 666 Coils Coil 151 171 - -
Mtr5g2297 666 CDD STKc_IRAK 340 604 - -
Mtr5g2297 666 Gene3D Transferase(Phosphotransferase) domain 1 410 612 - -
Mtr5g2297 666 ProSiteProfiles Protein kinase domain profile. 334 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2297 666 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Mtr5g2297 666 MobiDBLite consensus disorder prediction 631 666 - -
Mtr5g2297 666 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Mtr5g2297 666 Pfam Salt stress response/antifungal 32 126 IPR002902 -
Mtr5g2297 666 Pfam Salt stress response/antifungal 149 241 IPR002902 -
Mtr5g2297 666 SMART serkin_6 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2297 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2297 Mtr-Chr5 30204664 30207973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2297 9 666 Receptor kinase-like Gene Family AT4G05200 47.485 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr5g2297 PK_Tyr_Ser-Thr 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2297 - - gmx:100791056 803.897