Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2296 ATGAGATTTATAATTTCTTGTAGTTTCCTCTTTGCCATAATAATAATATTAATCCTATGTTATGAAACCATAGCTCAGACAGATTTTACTCCATCATGTGCTGATGATAATAGCAACTACACAAAAAACAGCACATATCAACAAAACCTCAACACACTTTTATCAACTCTAACTTCCAACACAGAAATCACCTACGGTTTCTACAACTTCTCATTCGGCGAAGACAACAACAAAGTATACGCCATAGGATTATGCAGAGGAGATGTTAATCCAAATGATTGCCGCAGTTGTCTTAACAATTCAAGAGTTCTTCTAACACAAAATTGTCCAAACAAAAAAGAAGCAATTGGTAGGATTAACAAATGCATGCTGCGTTACTCAAACCGGTTGATATTTGGACTAATGGAAACATTCCCTGATTTTTCTATTCCGAATCCATTCAATGCAACAGATGTGGGTAAGTACAATCAAGTGGTAGGGAAATTGTTGTATGATTTGAAAACTGAAGCTGCAACTGGTGATTCTATGAAAAAATATGCTACAAGAAACGTAACTGGTCCAAATTTTCAAGATATATATAGTCTTATGCAGTGTACACCTGATTTAAGTTATTTGGATTGCAATCAATGTTTGGATCAAGCTATAGCTAGTCTTCCATCTTGTTGTGTAAATAAGGTGGGTGGGAGAGCTATTAGACCAAGTTGTAATCTTAGATATGAAAATTATAGGTTCTATGAACGTAATGCTCAACCTCCGCCACCTACTTCACCATCGACCAATCACACTTCCTCTCAAGGAAAGGATCACACATCCAGAACTGCCATTATCATAGCAATCCCAATTGTTATTATTGTTTTGGTGGTCTGTTTCATCTGCATTTATCTACGACTACGTGTGAAGAAACCAAGGAAAACTAATCAAAAATATGGCAATATCTCAGTTCCTTCAGAAAATGATGAAATTAGAAACTTTGAGTCATTACAATTCAACTTTGACACTGTAAAAGTTGCTACAAATGACTTCTCTGATTCTAATAAACTTGGCGAAGGCGGATTTGGAGCTGTTTATCAGGGTACGCTCTCTAATGGACAAGTGATTGCCGTCAAAAGGTTGTCCATGAATTCTGGCCAAGGAGATCTGGAATTTAAGAATGAATTAATCTTGATGGCTAAACTTCAACATCAAAATTTAGTTAGGTTACTTGGTTTTACTATCGAAGGGAGAGAAAGACTACTAGTCTATGAATTTGTTCCCAATAAAAGTCTTGACTACTTCATATTTGATCCTACAAAGAAAGCACAATTAGATTGGGAAAAACGCTACAAAATCATTAAAGGTATTGCTCGAGGTGTTCTCTATCTTCATGAGGATTCTCGACTACGCATTATACACCGTGATCTCAAAGCAGGCAATATTCTCTTAGATGAAAACATGAATGCTAAGATATCAGATTTCGGCATGGCAAGACTAATTCTTGTGGATCAAACACAAGAAAATACAAGTAGTGTTGTTGGAACTTACGGGTATATGGCACCTGAGTATGTAATGCATGGAGAATTTTCAGTAAAATCAGATGTCTTCAGTTTTGGTGTACTAGTTCTTGAGATTATAAGTGGCCTAAAGAATAGTGGCACTCATCATGGGGAAATTACGGAGGATCTATTGAGCTTTGTATGGAAAAGTTGGAGGGAAGGAACAACTACAAATATTATAGATTCATCACTATTCGACGACAGTTCAAGAAATGAAATCATGAGATGCATTCATATTGGGTTACTTTGTGTGCAAGACAATGTAGCTAGAAGACGAACCATGGCTACCATTGTACTTCTGATAAGTAGCAATTCTCTCACTCTCCCTATACCTTCAGAACCTGCATTTTTTATGGACAGTAGAACGGTAAGTCTTCCAGAAATGCGGTTGTGCGAAGAGAATTCAGGGACAACGAGATCAAGTCAATCTACAACTAAATCAGCTCCAGTATCAGTAAACGAGGCTTCATTTACTGATCCATATCCTCGTTAG 2025 0.3674 MRFIISCSFLFAIIIILILCYETIAQTDFTPSCADDNSNYTKNSTYQQNLNTLLSTLTSNTEITYGFYNFSFGEDNNKVYAIGLCRGDVNPNDCRSCLNNSRVLLTQNCPNKKEAIGRINKCMLRYSNRLIFGLMETFPDFSIPNPFNATDVGKYNQVVGKLLYDLKTEAATGDSMKKYATRNVTGPNFQDIYSLMQCTPDLSYLDCNQCLDQAIASLPSCCVNKVGGRAIRPSCNLRYENYRFYERNAQPPPPTSPSTNHTSSQGKDHTSRTAIIIAIPIVIIVLVVCFICIYLRLRVKKPRKTNQKYGNISVPSENDEIRNFESLQFNFDTVKVATNDFSDSNKLGEGGFGAVYQGTLSNGQVIAVKRLSMNSGQGDLEFKNELILMAKLQHQNLVRLLGFTIEGRERLLVYEFVPNKSLDYFIFDPTKKAQLDWEKRYKIIKGIARGVLYLHEDSRLRIIHRDLKAGNILLDENMNAKISDFGMARLILVDQTQENTSSVVGTYGYMAPEYVMHGEFSVKSDVFSFGVLVLEIISGLKNSGTHHGEITEDLLSFVWKSWREGTTTNIIDSSLFDDSSRNEIMRCIHIGLLCVQDNVARRRTMATIVLLISSNSLTLPIPSEPAFFMDSRTVSLPEMRLCEENSGTTRSSQSTTKSAPVSVNEASFTDPYPR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2296 674 Pfam Salt stress response/antifungal 150 242 IPR002902 -
Mtr5g2296 674 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Mtr5g2296 674 Gene3D - 27 130 IPR038408 -
Mtr5g2296 674 Gene3D - 141 244 IPR038408 -
Mtr5g2296 674 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 641 - -
Mtr5g2296 674 MobiDBLite consensus disorder prediction 643 665 - -
Mtr5g2296 674 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Mtr5g2296 674 Gene3D Phosphorylase Kinase; domain 1 304 416 - -
Mtr5g2296 674 MobiDBLite consensus disorder prediction 643 674 - -
Mtr5g2296 674 SUPERFAMILY Protein kinase-like (PK-like) 326 636 IPR011009 -
Mtr5g2296 674 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Mtr5g2296 674 SMART serkin_6 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2296 674 Gene3D Transferase(Phosphotransferase) domain 1 417 618 - -
Mtr5g2296 674 Pfam Protein tyrosine and serine/threonine kinase 344 542 IPR001245 GO:0004672|GO:0006468
Mtr5g2296 674 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Mtr5g2296 674 MobiDBLite consensus disorder prediction 247 267 - -
Mtr5g2296 674 ProSiteProfiles Protein kinase domain profile. 341 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2296 674 CDD STKc_IRAK 347 609 - -
Mtr5g2296 674 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 12 641 - -
Mtr5g2296 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2296 Mtr-Chr5 30189220 30202683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2296 9 674 Receptor kinase-like Gene Family AT4G21410 48.911 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr5g2296 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2296 - - gmx:100782800 793.497