Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2294 ATGAGATTTAAAATTTGTTGTAGTTTTCTCCTTCTCATCATAACCACATTCCTATGTTATGAAACCATTGCCCAGCCAGAATTATATCCATCATGTTCTAATGATAACTACACAAAAAACAGCACATATCAACAAAACCTCAACACACTTTTATCAACTCTAACTTCCAACACAGAAATCACCTACGGTTTCTACAACTTCTCATACGGCAAAGGCAACAACAAAGTATACGCCATAGGATTATGTAGAGGAGATGTTAATCCAAATGATTGCCGCCGTTATCTTAACAATTCAAGAGTTCTTCTAACACAAAATTGTCCAAACCAAAAAGAAGCAATTATTTGGACTGACAATTGCATGTTGCGTTACTCCAATCGGTCCATATTTGGTTTAATGGAATCAAAACCTGAATTATTTGCATGGAATGCACTTAATGTAACAAAGGTCGGTAAATATAATAAAGTACTTTTAGGAAATTTGTTGTATGATTTGAAAACTGAAGCTGCATCTGGTGATTATATGAAAAAATATGCTGTGGGAAATGTAACAGGAAATATAACAGGTTCAAATTTTCGGGATATATATAGTCTAATGCAGTGTACACCTGATATGAGTTCTTTGGAATGTAATGAATGTTTGGAGCAGGCTATAGATAGTCTTCCATCTGAATTTGAAAGTTCGATTGGTGCTAGAGTTATGAAACCAAGTTGTAATATTAGATATGAAAGTTATCTGTTCTATGCACTTCCTGTGCACCCGCCGCCACCACACACTCCAGCATCCACCAATCACAGCTCATCTCAAGAAAAGGAACACACATCAAGAACTGGCATCATCATAGCAATCCCAGTTGTTATTGTTGTTTTGGTTCTCTGTTTCATCTGCATATATTTACGACTAAGAGTGAAGAAACCAAGGGACGATACTAAAATTCCTTCAGAAGATGATGATGAAGCTACAACCTTTGAGTCATTACAATTTAACTTTGACACTATAAGAGTTGCTACAAATGATTTCTGTGATTCTAATAAACTTGGGCAAGGTGGATTTGGAGCTGTTTATCAGGGTAGACTCTCTAATGGACAAGTGATTGCGGTGAAAAGGTTATCCATAAATTCTGGTCAAGGAGATCTAGAATTTAAGAACGAAGTACGTTTGGTGGCCAAACTTCAACACCGAAATTTAGTTAGACTCCTTGGTTTTACTGTTGAAGGGAGAGAAAGATTACTTGTCTATGAATTTGTTCCTAATAAAAGTCTTGACTACTTCATATTTGATCCAACAAAGAAAGCACAATTAGATTGGGAAAAGCGCTACAAAATCATTCAAGGTATTACTCGAGGTGTTCTTTATCTTCATGAAGATTCTCGACTACGCATTATACACCGTGATCTTAAAGCAAGCAACATTCTCTTAGATGGAGACATGAATGCTAAGATAGCAGATTTTGGCATGGCAAGACTAATTCTTGTGGATCAAACACAAGCAAATACAAGTAGAATTGTTGGAACCTATGGATACATGGCACCTGAGTATGTAATGCATGGAGAATTTTCGGTGAAATCAGATGTCTTTGGTTTTGGTGTACTAGTTCTTGAGATTATAAGTGGCCAAAAGAATAGTAGCACACGTCACGGGGAAAATTCAGAGGATCTATTGAGCTTCGCATGGAGAAGTTGGAGGGAAGAAACAGCTGCAAATATTATAGATCCATTATTATACAACAGTTCAAGAAATGAAATCATGAGATGCATTCATATTGGCTTACTATGTGTCCAAGACAATGTAGCTAAACGACCAACCATGGCTACCATTGCACTCATGCTAAGTAGCAGCTATTCTCTCACTCTCCCAATACCTGCAGAACCTGCATTTTTTATGGACAGTAGGGTTAGAAGCTTTCCAGAAATGCGGCTGTGGGAAGAGAACTCAAGTAAATCCACAATTAAATCAGTAAATGAGGCTTCATTTACTGAGCCATATCCTCGTTAG 1992 0.37 MRFKICCSFLLLIITTFLCYETIAQPELYPSCSNDNYTKNSTYQQNLNTLLSTLTSNTEITYGFYNFSYGKGNNKVYAIGLCRGDVNPNDCRRYLNNSRVLLTQNCPNQKEAIIWTDNCMLRYSNRSIFGLMESKPELFAWNALNVTKVGKYNKVLLGNLLYDLKTEAASGDYMKKYAVGNVTGNITGSNFRDIYSLMQCTPDMSSLECNECLEQAIDSLPSEFESSIGARVMKPSCNIRYESYLFYALPVHPPPPHTPASTNHSSSQEKEHTSRTGIIIAIPVVIVVLVLCFICIYLRLRVKKPRDDTKIPSEDDDEATTFESLQFNFDTIRVATNDFCDSNKLGQGGFGAVYQGRLSNGQVIAVKRLSINSGQGDLEFKNEVRLVAKLQHRNLVRLLGFTVEGRERLLVYEFVPNKSLDYFIFDPTKKAQLDWEKRYKIIQGITRGVLYLHEDSRLRIIHRDLKASNILLDGDMNAKIADFGMARLILVDQTQANTSRIVGTYGYMAPEYVMHGEFSVKSDVFGFGVLVLEIISGQKNSSTRHGENSEDLLSFAWRSWREETAANIIDPLLYNSSRNEIMRCIHIGLLCVQDNVAKRPTMATIALMLSSSYSLTLPIPAEPAFFMDSRVRSFPEMRLWEENSSKSTIKSVNEASFTEPYPR* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2294 663 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Mtr5g2294 663 ProSiteProfiles Protein kinase domain profile. 339 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2294 663 CDD STKc_IRAK 345 609 - -
Mtr5g2294 663 Gene3D Phosphorylase Kinase; domain 1 304 414 - -
Mtr5g2294 663 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 639 - -
Mtr5g2294 663 Pfam Salt stress response/antifungal 149 244 IPR002902 -
Mtr5g2294 663 Pfam Salt stress response/antifungal 32 125 IPR002902 -
Mtr5g2294 663 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 9 639 - -
Mtr5g2294 663 ProSiteProfiles Gnk2-homologous domain profile. 134 246 IPR002902 -
Mtr5g2294 663 Pfam Protein tyrosine and serine/threonine kinase 343 606 IPR001245 GO:0004672|GO:0006468
Mtr5g2294 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Mtr5g2294 663 Gene3D - 26 127 IPR038408 -
Mtr5g2294 663 Gene3D - 138 246 IPR038408 -
Mtr5g2294 663 SMART serkin_6 339 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2294 663 SUPERFAMILY Protein kinase-like (PK-like) 323 632 IPR011009 -
Mtr5g2294 663 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Mtr5g2294 663 Gene3D Transferase(Phosphotransferase) domain 1 415 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2294 Mtr-Chr5 30172054 30177551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2294 11 631 Receptor kinase-like Gene Family AT4G21410 48.758 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr5g2294 Pkinase 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2294 - - gmx:100782800 779.63